Pantoea phytobeneficialis: CTZ24_11055
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Entry
CTZ24_11055 CDS
T09899
Name
(GenBank) DNA-binding transcriptional regulator H-NS
KO
K03746
DNA-binding protein H-NS
Organism
ppho
Pantoea phytobeneficialis
Brite
KEGG Orthology (KO) [BR:
ppho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppho03036
]
CTZ24_11055
03400 DNA repair and recombination proteins [BR:
ppho03400
]
CTZ24_11055
Chromosome and associated proteins [BR:
ppho03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
CTZ24_11055
DNA repair and recombination proteins [BR:
ppho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CTZ24_11055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF3037
PaaX_C
DUF6626
HAUS-augmin3
IL15
Spem1
Motif
Other DBs
NCBI-ProteinID:
QGR06926
UniProt:
A0AAP9KPF4
LinkDB
All DBs
Position
2367143..2367550
Genome browser
AA seq
135 aa
AA seq
DB search
MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEESHAQAENAERTRKLEQ
YREMLIADGIDPNELLQALSETKVAGKTKRAARPAKYQYVDENGETRTWTGQGRTPAVIK
KAIEEQGKQLDDFLL
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcacttaaaattcttaataatatccgtacattgcgcgcacaggctcgggaa
tgcactctggaaactctggaagagatgctggagaaactcgaagttgtggtgaatgaacgt
cgtgaagaagagtctcatgcgcaagcagaaaatgccgagcgtacgcgtaaactcgaacaa
tatcgtgagatgctgattgctgatggtatcgacccgaatgagttattgcaggctttatca
gaaactaaagttgcgggtaaaaccaagcgcgcagctcgtccggcaaaatatcagtatgtt
gacgaaaatggtgaaacccgtacctggactggtcagggtcgtacaccagccgtgattaaa
aaagcgattgaagaacaaggcaaacagttggacgatttcctgctgtaa
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