Pantoea phytobeneficialis: CTZ24_11230
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Entry
CTZ24_11230 CDS
T09899
Name
(GenBank) fatty acid metabolism transcriptional regulator FadR
KO
K03603
GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
Organism
ppho
Pantoea phytobeneficialis
Brite
KEGG Orthology (KO) [BR:
ppho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppho03000
]
CTZ24_11230
Transcription factors [BR:
ppho03000
]
Prokaryotic type
Helix-turn-helix
GntR family
CTZ24_11230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FadR_C
GntR
FCD
HTH_Crp_2
TrmB
HTH_IclR
HTH_24
Fe_dep_repress
PaaX
MarR_2
HVO_A0261_N
Cut8
Rrf2
Motif
Other DBs
NCBI-ProteinID:
QGR06958
LinkDB
All DBs
Position
complement(2403708..2404427)
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AA seq
239 aa
AA seq
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MVIKAQSPAGFAEEYIIESIWNSRFPPGSILPAERELSELIGVTRTTLREVLQRLARDGW
LTIQHGKPTRVNDFWETSGLNILETLARLDHDSVPQLIDNLLSVRTNIASIFISRALRHH
PDKARDVLETALNSEDQADAYTELDYRVFRGLAFASGNPIYGLILNGLKGLYTRVGRHYF
SNPEARELARSFYRQLADLCGVKPTQEQIVDCVRDYGRRSGEIWHGMQKSMPDDLGTKR
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggtgattaaggcgcaaagccccgcaggatttgctgaagagtatattattgaaagcatc
tggaacagtcgttttccgccggggtcaattctacctgccgaacgtgagctttctgaattg
atcggggtgacccgtactacgctgcgtgaagttttacagcgcctggcgcgtgatggctgg
ctgaccatccagcacggtaaacctacgcgggtgaatgatttttgggaaacatcaggttta
aacattctcgaaactctggcaaggctcgatcatgatagcgtgccgcagctgattgataat
ctgttgtcggtacgaaccaatattgcctctatctttatcagccgtgccttacgtcatcat
ccggacaaagcgcgcgatgtgctggaaacggcgctgaattctgaggatcaggcagatgcc
tacactgagctggactatcgtgtattccgtggtctggcatttgcttccggtaacccgatc
tacggtttgatcctcaatggactgaaaggtctgtatacccgcgttggccgccactacttc
tccaatccggaagcgcgtgagttggctcgcagtttctaccgtcaactggcggatctgtgt
ggggttaaaccgacgcaggagcagattgtcgattgcgtgcgtgattatggtcgccgcagc
ggtgaaatctggcatggcatgcagaaaagtatgccggatgatttggggactaagcgttaa
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