Pantoea phytobeneficialis: CTZ24_11280
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Entry
CTZ24_11280 CDS
T09899
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ppho
Pantoea phytobeneficialis
Pathway
ppho00061
Fatty acid biosynthesis
ppho00071
Fatty acid degradation
ppho01100
Metabolic pathways
ppho01212
Fatty acid metabolism
ppho02024
Quorum sensing
ppho04146
Peroxisome
Module
ppho_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppho00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CTZ24_11280
00071 Fatty acid degradation
CTZ24_11280
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CTZ24_11280
09145 Cellular community - prokaryotes
02024 Quorum sensing
CTZ24_11280
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppho01004
]
CTZ24_11280
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppho04147
]
CTZ24_11280
Enzymes [BR:
ppho01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CTZ24_11280
Lipid biosynthesis proteins [BR:
ppho01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CTZ24_11280
Exosome [BR:
ppho04147
]
Exosomal proteins
Exosomal proteins of breast milk
CTZ24_11280
Exosomal proteins of breast cancer cells
CTZ24_11280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF4235
Motif
Other DBs
NCBI-ProteinID:
QGR08730
UniProt:
A0AAP9H8J8
LinkDB
All DBs
Position
complement(2411801..2413507)
Genome browser
AA seq
568 aa
AA seq
DB search
MATQQESRGESLTKVWLKRYPPDVPAEITADRYTSLIDLFEHAATRYADQVAFVNMGQPM
TYRQLDQQSRAFAAWLQQGLKLKAGDRVALMMPNLLQYPVALFGVLRAGMVVVNVNPLYT
PRELKHQLNDSGASAIVIVSNFAHTLEKVVAETQVKHVMLTRMGDQLAPIKGTLVNFVVR
YVKKLVPKYHLPGAVSFRLALQQGEQLTYQRPDVTNDDLAFLQYTGGTTGVAKGAMLTHG
NMQANLEQAKATYGKLLRPGQECVVTALPLYHIFALTVNCLLFLDLGGQNLLITNPRDIP
GFVRELAKFPFTAITGVNTLFNALLNDANFNKLDFSTLRMSAGGGMAVQKAVAERWEKLT
GHYLLEGYGLTECSPLVSVNPYDITCHTGSIGLPVPSTDVRIVDEDEHDVLPGEPGELCV
RGPQVMVGYWQRPEATEEVLKNGWLHTGDIVTVDSEGFIRIVDRKKDMILVSGFNVYPNE
IEDVLMQHEKVREAAAIGVPSDLSGEAVKVCIVKKDPTLTKEEVLDHCRRQLTGYKVPKI
IEFRDELPKTNVGKILRRELRDEVKREG
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggctacgcaacaagaatctcggggtgaatctttgactaaggtttggctgaaacgctat
ccgccggatgtcccagcggaaattactgcggaccgttatacctctttgatcgatctattt
gagcatgcagcaacgcgttatgccgatcaggtcgctttcgtaaacatgggtcaaccgatg
acctatcgtcagctggaccagcaaagtcgtgctttcgctgcctggttacaacaggggttg
aagcttaaagccggtgaccgggttgcgctgatgatgcctaatctgctgcaatatccggtg
gcgctgtttggcgtgctgcgtgcaggcatggtggtagtgaatgttaacccactctacaca
ccacgcgagttaaagcatcaacttaacgacagcggtgccagtgcgattgtcatcgtctcg
aattttgcgcacaccttagaaaaagtcgtggccgagactcaggttaaacatgtgatgtta
acgcgcatgggcgatcaactggcccccatcaaaggaacgctggttaattttgttgttcgc
tatgtgaagaagttggtgccgaaataccatctgccaggtgccgtttcttttcgtctggcg
ttgcagcagggggagcaactgacttatcaacgccctgatgtgaccaatgatgacctggcg
tttctgcaatataccggtggtaccaccggggtagcgaaaggcgcaatgctgacgcacggc
aatatgcaggccaacctcgaacaggcgaaagccacctatggcaagctgctgcgtccggga
caggagtgcgtggtcaccgccttgccgctgtaccatatttttgctctgacggttaactgt
ctgctgttcctcgatctgggcggccagaacctgttgatcaccaatccgcgcgacatcccg
ggttttgtcagggagctggctaagttcccgttcaccgcgattaccggtgtgaataccctg
ttcaacgcgctgctcaacgatgccaactttaataagctggatttctccaccctgcggatg
tcggcgggcggcggtatggcggtgcaaaaagccgtggctgaacgctgggagaaactgacc
ggccactatctgctggaaggctacggtttgaccgagtgttcaccgttggtgtcggtgaat
ccttatgacatcacctgccataccggaagcatcggtttaccggtaccttctaccgatgtg
cgtatcgtcgatgaagatgaacatgatgtcctgccgggtgagccgggagagctttgcgta
cgcggcccgcaagtgatggtcggttactggcaacgcccggaagctaccgaagaagtgcta
aaaaatggctggctgcataccggtgatattgttaccgtggacagcgaaggctttatccgc
atcgtcgatcgcaaaaaagacatgattctggtgtcgggctttaacgtgtatcctaatgag
atcgaagatgtgctgatgcagcatgagaaagtgcgagaggccgccgcgattggcgtaccg
agcgatctttccggtgaagcggtgaaagtgtgtatcgtgaagaaagatcccaccttaacc
aaagaagaagtgctggatcactgtcgccgtcagctaaccggctacaaggtgccgaagatt
atcgagtttcgcgacgagttgcctaagactaatgtcggcaagattttacgtcgtgagttg
cgcgatgaggtgaagcgggaagggtaa
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