Pantoea phytobeneficialis: CTZ24_12845
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Entry
CTZ24_12845 CDS
T09899
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ppho
Pantoea phytobeneficialis
Pathway
ppho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CTZ24_12845 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppho03400
]
CTZ24_12845 (recC)
Enzymes [BR:
ppho01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CTZ24_12845 (recC)
DNA repair and recombination proteins [BR:
ppho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CTZ24_12845 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QGR07258
UniProt:
A0AAP9KPV2
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All DBs
Position
2756236..2759616
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AA seq
1126 aa
AA seq
DB search
MFRVYHSNQLDLLKDLAVTLIKSEPLTDPLAAEQVLVQSPGMAQWLQMELASSFGIAANI
DFPLPASFIWNMFVQVLPDIPQESAFTKASMSWKLMHRLPALLEQEAFLPLRHYLNDDDD
KRKLYQLSARVADLFDQYLVYRSDWLNSWERGELIEGLGDSQQWQAALWRDLVSFTESLG
QPLWHRANLYARFIRTLEQADSPPPGLPQRVFICGISALPPVYLQALEALGRHIDIHLLF
TNPCRHYWGDIQDYAFLAKLQSRQRRRLHSNEQQSLFRDPALASSLFNDAGEQQLTNPLL
ASWGKLGRDNLFLLSQMDAATNDIDAFVDIPTDTLLHALQADLLDLEDNAVIGVNAGELA
NSQGKRLLDPQDHSLTIQVCHSAQREVEILQDHLLALMEADPNLKPRDIIVMVADIDSYA
PFIQAVFASAPSSRYLPFAISDRRASQAHPAILALLSLLALPESRFASEEVLALLEVPAL
AQRFSVDESGLRLLRRWVMESGIRWGLDDASVEALALPVTGQHTWRFGLQRMLLGYALES
RNGDWQGILPYDESTGLIAELAGHLAELLAKLDDWRTRLAQERTLNDWLPLCREMIESFF
SGDSESEVALMLVETQWKQIIEQGMQASYQQAIPVTLLRDELRSRLDQQRISQRFLAGPV
NFCTLMPMRSIPFKVVCLLGMNDGVYPRTLAPLGFDLMQQQMRKGDRSRRDDDRYLFLEA
LISAQQQLYISYIGRAIQDNTERYPSVLVTELVDYLGQSFCLPGDEACEPDVSEQRVREH
LQTLHSRMPFAPENYLPGRNGQSFAAEWLPAAAGQGEAQPDFVQPLDALPLTTLSLEQLL
RFWRHPVRAWFQQRLGVAFWMEESELPDSEPFAPDSLERYQINAQLLNTLVAGEDPAQLY
ARHRAAGNLPYGAFGELFWQSQTEEMQEVAAEVSGQRQISESWEVNLRLGDVQLTGWLTQ
VQADGLLRWRPGVLNMNDGLLLWLEHLVYCALGGSGESRMYGRKQSHWRFNALPCDQALS
LLQEYVAGYQVGLAQPLMLLNKSGGAWLEASFDAKTRQLLDDEATQKKARSRLLQAWQGG
FQLEGEGSDPYLQRLSRVLDDTALQAITEAARRWYLPVRLAHQDDE
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgttccgggtttaccactccaatcagcttgacctgttaaaagatctggcggtcacgttg
attaaatcagaaccccttacagacccgctggcggctgaacaggttctggtacaaagcccc
ggtatggcgcaatggctacaaatggaactggcgagcagctttggtattgcggccaacatt
gattttccgctccccgccagctttatctggaacatgtttgtgcaggtgctgccagatatt
ccgcaggaaagcgccttcacgaaagccagcatgagctggaaactgatgcatcgcctgccc
gccctgttggagcaggaagcatttctgccgctgcgtcactacctgaacgacgacgatgat
aagcgtaagctgtatcagctcagtgctcgcgttgcagacctgtttgaccagtatctggtc
taccgatcggactggctcaatagctgggagcgcggcgagctgattgaagggttgggtgat
tcgcaacagtggcaggcagcattatggcgcgacctggtcagcttcaccgaaagccttggt
cagccgctctggcaccgtgccaatttatatgcgcgctttatccggacactggagcaggca
gacagcccgccgccaggcttgccgcagcgcgtatttatttgcgggatttcggcactgccg
ccggtttatttgcaggcgctggaggcgttggggcgccacatcgatattcatctgctgttc
accaatccctgtcgtcattactggggggacattcaggattacgcatttctggctaagctc
cagagccgtcagcgccgccgacttcattccaatgaacagcaatcgctgtttcgcgatcct
gcgttggcctcgtcgctgtttaatgacgcgggtgaacaacaattaacgaatccgctgctc
gcatcgtggggcaagttagggcgcgataatcttttcctgctcagtcagatggacgcggct
acaaacgatattgatgcttttgtcgacatccccacagatactttgctgcatgcgttgcag
gcggatttacttgacctggaagataatgcggtaattggtgtcaacgccggggaactggca
aacagccaggggaagcgtttgctggatccgcaggatcattcgctgaccattcaggtgtgc
catagcgcccagcgtgaagtggaaattttgcaggaccatttattggcgctgatggaagcc
gatccaaacctgaagccgcgcgatatcatcgtgatggtggcagatatcgacagctacgct
ccctttatccaggcggtgttcgccagcgcaccatcatcgcgttatttgccgttcgccatc
tctgaccgccgtgccagccaggcacatccggcgatcctggcgttgctgagtttactcgca
ctgccggagagtcgcttcgcttcggaagaagtgctggcgctgttggaggttccggcactg
gcgcagcgcttctcggtggatgaaagcggattacgcctgctgcgccgttgggtgatggaa
tccgggattcgttgggggctggatgatgccagcgtggaagcactggcactcccggtcacc
gggcagcacacctggcgttttggtttgcagcgtatgctactgggctatgcgctggaaagt
cgcaacggcgactggcaaggcatcctgccttatgacgaatccaccggattaattgccgaa
ctggcggggcatctggcggagttgctggcaaaactcgatgactggcgtacgcgactggcg
caggagcgtacccttaatgactggttgccgctatgccgtgaaatgatcgagagtttcttc
agcggtgatagtgaaagcgaagtggcgctaatgctggtggaaacccagtggaaacagatc
attgagcagggcatgcaggcctcttatcaacaggcgattcctgtgacgttactgcgcgat
gagttacgttcacggctcgatcagcaacgcatcagtcaacgtttccttgcaggcccggtt
aatttctgtacgctgatgccgatgcgttcgatcccgtttaaggtggtgtgtttgttaggg
atgaacgatggtgtttacccccgcactctggcaccgcttggctttgatctgatgcaacag
cagatgcgcaaaggcgatcgtagccgccgtgatgatgaccgctatctgttccttgaagcg
ttaatttccgcgcagcagcagctgtatatcagctacatcggccgtgccattcaggataat
accgagcgctatccctcggtattggtcacggagttggttgactatctcggtcagagcttc
tgtctgccgggggatgaagcctgtgaaccggatgtcagcgagcagcgcgtgcgcgaacat
ttgcagacgctgcacagccgtatgccatttgcccctgaaaactatttgccggggcgtaat
gggcaaagttttgccgctgagtggttacctgccgctgcagggcagggtgaggcgcagcct
gattttgtccagccattggatgcgctgccactcaccacattgtcgctggagcaacttttg
cgtttctggcgtcatccggtacgtgcctggtttcagcaacggctgggggtggctttctgg
atggaggagagtgagttgcctgacagcgaacctttcgcccctgacagcctcgaacgttat
cagatcaacgcgcagttgctgaataccctggttgccggagaggatcctgcacagttatat
gcccgtcatcgcgcggcgggtaacctgccttatggcgcttttggggaacttttctggcaa
agccagaccgaagagatgcaggaagtggccgctgaggtcagtggacaacgtcagatatcg
gaaagctgggaagtgaatctacggcttggtgatgtgcagttgaccggctggcttacgcag
gtgcaagctgatggactgctgcgctggcgtcccggcgtactcaatatgaatgatggctta
ctgttgtggctggagcatctggtgtattgcgcgctgggaggcagtggcgaaagccggatg
tatgggcgtaaacagagccactggcgttttaacgcacttccttgtgaccaggcgctgagt
ttgttgcaggagtatgtggccgggtatcaggtaggattagcacagccactgatgctgttg
aataaatccggcggagcctggctggaagcgagttttgatgccaaaacccgccagttactg
gatgacgaggcgacgcagaaaaaagcgcgcagtcggctgttacaggcctggcagggtggt
ttccaactggaaggtgagggcagtgatccttacctccagcgtctgagccgtgtgcttgat
gacacggcattacaggcaatcactgaggcggcacgacgctggtatttgccagtacgtctg
gcgcatcaggatgatgaatag
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