Pantoea phytobeneficialis: CTZ24_13100
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Entry
CTZ24_13100 CDS
T09899
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ppho
Pantoea phytobeneficialis
Brite
KEGG Orthology (KO) [BR:
ppho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppho03016
]
CTZ24_13100
Enzymes [BR:
ppho01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CTZ24_13100
Transfer RNA biogenesis [BR:
ppho03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CTZ24_13100
Prokaryotic type
CTZ24_13100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
MesX
Motif
Other DBs
NCBI-ProteinID:
QGR07305
UniProt:
A0AAP9H5X4
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All DBs
Position
2818040..2819083
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AA seq
347 aa
AA seq
DB search
MSELLYLHGKPRATGVIKANPEDFVVIEDLGYPYDGEGEQLLVRIRKIGCNTRFVAEALA
KFLGVHVRDLSYAGMKDRHAVTEQTLCFRLPGNAMPDLSEFKLEGVEILQVVRHKRKLRT
GALAGNAFRLVIRQISDQTVVEQRLQKIQKSGVPNYFGEQRFGREGNNLTQAQQWAQDRF
RPRDRNKKGLLLSATRSHLFNQVTSARLQRDGNLDAVMSGDALQLTGRGSWFVAQTEELT
ELQQRVNQDELRITAPLPGRGDWGTQVEALEFEQHSLAGAAEMITLLERERVDAARRAMR
VVPKDLHWNWWDDVTLEMAFWLPAGSFATSVVRELLQQEGNDADIAE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaactgctgtacctgcacggtaagccgcgcgccaccggcgtgattaaagccaat
ccagaagattttgttgtcattgaggatcttggttatccctatgacggcgaaggtgaacag
ttgctggtacgcatccgtaaaatcggttgcaatacccgctttgtcgccgaagcgctggcg
aaatttctcggcgtgcatgtgcgtgatctcagctatgccgggatgaaagaccgccatgcg
gtgaccgagcagacgctgtgtttccgtttaccgggcaacgcgatgcctgatctgtctgaa
tttaagctggaaggcgtagaaatcctgcaggtggtgcgccacaagcgtaaactacgtacc
ggtgcgctggcggggaatgcgtttcgtctggtgatccgtcaaatctcggatcagaccgtg
gtggaacagcgtttacagaaaattcagaaaagcggtgtgccgaactattttggtgagcag
cgttttggccgtgagggtaataatctgacccaggcacagcagtgggcgcaggatcgattc
cgcccacgcgatcgcaacaaaaaaggcttgttgctctcggccacccgcagtcatctgttt
aatcaggtcaccagcgcgcgtttgcagcgagacggcaatctcgacgcggtgatgagcggc
gatgccttgcaactgaccgggcgtggtagctggttcgtcgcgcagacagaagaattgact
gaactgcaacagcgcgtgaatcaggatgaactgcggatcactgcgccgttgcctggtcgt
ggcgactggggcacccaggtggaagcgcttgaatttgaacagcacagcctggcaggtgcg
gcagaaatgattacactgcttgagcgtgaacgtgttgatgcggcacgccgcgcgatgcgt
gtggtgccaaaggacttgcactggaactggtgggatgatgtgacgctggagatggcgttc
tggctgcctgcgggcagctttgctaccagcgtcgtgcgtgagcttctccaacaagaaggt
aacgatgcggatattgctgagtaa
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