Pantoea phytobeneficialis: CTZ24_13725
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Entry
CTZ24_13725 CDS
T09899
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ppho
Pantoea phytobeneficialis
Pathway
ppho03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppho00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CTZ24_13725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppho03019
]
CTZ24_13725
03009 Ribosome biogenesis [BR:
ppho03009
]
CTZ24_13725
03036 Chromosome and associated proteins [BR:
ppho03036
]
CTZ24_13725
Enzymes [BR:
ppho01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CTZ24_13725
Messenger RNA biogenesis [BR:
ppho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CTZ24_13725
Ribosome biogenesis [BR:
ppho03009
]
Eukaryotic type
90S particles
RNase
CTZ24_13725
Prokaryotic type
rRNA processing factors
CTZ24_13725
Chromosome and associated proteins [BR:
ppho03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CTZ24_13725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QGR07415
UniProt:
A0AAP9H628
LinkDB
All DBs
Position
2937109..2937789
Genome browser
AA seq
226 aa
AA seq
DB search
MNPILINKLQRKLGYTFTHPELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKSGGFRRESILADTVEALI
GGIFLDSNIQTVEKLILDWYQTRLEQISPGDKQKDPKTRLQEFLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGMAEPVVGVGSSRRKAEQAAAEQALIKLGLE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatcctcattaacaagttgcagcgcaaactgggctacacttttactcatccg
gaattgttgcaacaggctctgactcaccgcagcgccagcagtaaacacaacgagcgtctt
gaatttcttggcgattcaattctcagctatgtcattgctaatgcgctgtatcaccgcttt
ccgcgggttgatgagggcgacatgagccgtatgcgtgcgacactggtacgtggaaatacg
ttggcagaaatggcgcgtgagtttgatcttggcgagtgtttacgtctggggccaggtgaa
ctgaaaagcggcggcttccgtcgcgaatcgattcttgctgatacggtggaagcgctgatt
ggcggcattttcctcgacagcaatattcagaccgtcgaaaagctaattctcgactggtat
caaacgcggctggaacagatcagtccgggcgataaacaaaaagatccaaaaacgcgcctg
caagagtttttgcagggacgccatctgccgctgccttcatatctggtagtgcaggtgcgt
ggtgaagcccacgaccaggaatttaccattcactgtcaggtgagtggcatggctgagccg
gtggtgggcgtaggttccagccgccgtaaagcagaacaggccgccgccgaacaggcgttg
attaaactcggccttgaatag
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