Pantoea phytobeneficialis: CTZ24_15870
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Entry
CTZ24_15870 CDS
T09899
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase DacD
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
ppho
Pantoea phytobeneficialis
Pathway
ppho00550
Peptidoglycan biosynthesis
ppho01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppho00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CTZ24_15870
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppho01002
]
CTZ24_15870
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppho01011
]
CTZ24_15870
Enzymes [BR:
ppho01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CTZ24_15870
Peptidases and inhibitors [BR:
ppho01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
CTZ24_15870
Peptidoglycan biosynthesis and degradation proteins [BR:
ppho01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
CTZ24_15870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
CDPS
Motif
Other DBs
NCBI-ProteinID:
QGR07818
UniProt:
A0AAP9H6Y8
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All DBs
Position
3420364..3421533
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AA seq
389 aa
AA seq
DB search
MLKRRLLVTVSGMIVWASLAQADDSMPFPLTPPAIDAASWVLMDATTGQILTAGNPDEER
NPASLTKLMTGYVVDRAIDQHKISRDDVVTVGKDAWAAGNPVFKGSSLMFLKPGDKVTVR
DLSRGVIIDSGNDACVALADYVAGSQQNFVTMMNSYVQKLGLTHTHFETVHGLDAPGQHT
TARDLAVLSRAIISGEPDFYAMYSEKTLTWNGITQNNRNGLLWDNNLHVDGLKTGHTETA
GFNIIASNIVGQHRLIAVIMGGKSSKGREEQARKLLVWGQNNFDTVQLFHAGKKIGTENV
WYGNPHQVDVGTTQDIYLSLPRGEVQNVKAKYVIDRKDLEAPLKANEQIGEIQVMDKDKQ
LASYPLYALNAVNKAGIVTRIEDYLKQKL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
gtgttgaaaaggcgtctgctggttactgtttctggaatgattgtttgggcatcgctggcg
caggctgacgacagcatgccgttccccctgacgcctccggcgattgatgcggcttcctgg
gtactgatggacgccacaaccggacagattctcaccgccgggaatcccgatgaggagcgc
aaccccgccagcctcaccaagctgatgactggctatgtggtggatcgtgccatcgaccaa
cacaaaatcagccgtgacgatgtggtgacggtgggtaaagatgcctgggcggccggcaac
ccggtattcaaaggttcctcgctgatgtttctcaaacccggcgataaggtcacggtacgt
gatctgagccgtggcgtgatcatcgattccggtaacgatgcctgtgtggcgctggccgac
tacgtcgcgggcagccaacaaaactttgtcaccatgatgaacagctacgtgcaaaagctc
ggcctgacccatacccattttgaaaccgtccacggtctggatgcacccggtcagcacacc
accgcgcgcgacctggcggtactgtcacgcgccatcatcagtggcgaacccgatttctat
gccatgtacagcgagaaaaccctcacctggaacggtattacgcagaacaaccgcaacgga
ttgctgtgggataacaacctgcacgtcgatggcctgaaaaccggccacaccgaaaccgcc
ggttttaacatcatcgcgtcaaacatcgttggtcagcatcggctgattgcggtgatcatg
ggcggcaaaagctccaaagggcgtgaagaacaggcgcgtaagctgctggtctggggacaa
aataacttcgacaccgtccagttgttccatgccgggaaaaaaatcggcacggaaaacgtc
tggtacggcaatccgcatcaggttgatgtcggtaccacccaggatatctacctgtcactg
ccgcgcggcgaagtgcaaaacgttaaagccaaatacgttatcgatcgtaaggatctggaa
gcgccgttaaaggccaatgaacagatcggcgagattcaggtgatggacaaagataaacag
ctggcgagctatccgctttacgcgctcaacgcggtcaataaagcgggtatcgtgacgcgc
attgaagattacctgaagcaaaaactgtaa
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