KEGG   Pantoea phytobeneficialis: CTZ24_16090
Entry
CTZ24_16090       CDS       T09899                                 
Symbol
clpV
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
ppho  Pantoea phytobeneficialis
Pathway
ppho03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppho00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CTZ24_16090 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppho02044]
    CTZ24_16090 (clpV)
Secretion system [BR:ppho02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CTZ24_16090 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 AAA_22 Clp_N AAA_16 NBD_SMAX1 nSTAND3 AAA_25 Sigma54_activat AAA_7 AAA_14 Zeta_toxin AAA_18 NACHT IstB_IS21 T2SSE DUF815 SRP54 Hpr_kinase_C AAA_33
Other DBs
NCBI-ProteinID: QGR07860
UniProt: A0AAP9H6Y2
LinkDB
Position
3472903..3475509
AA seq 868 aa
MSEISRAVLFGKLDTLLFTSLESATAFCKLRGNPYVELVHWLHQLMQQQDGDLQQVISHF
SLDENALTRDIVAALDRLPRGASAVSDLAEHIDSAVERAWVYASLKYAASRIRGGHLLIG
MLKTYSLASVLKGISSQFSRINVDVLLDQFETLLGHSKEAQQALTQPDVAAAPAAAGSST
LAQYAQDLTARARDGRIDPVTGRDEEIRQMVDILMRRRQNNPLLTGEAGVGKTAVVEGLA
LRIAAGDVPAPLRDVQLWLLDIGMLQAGAGMKGEFEARLQALINEVQSSPTPVVLFVDEI
HTLIGAGGQQGTGDAANLLKPALARGQLRTIGATTWAEYKKYIEKDPALTRRFQTVQVQE
PDEAKAIQMLRSTVSALEKHHQVLLLDEAVSAAVKLSHRYIPARQLPDKAVALLDTACAR
VAVSQGAQPAALEDCLHRLAALDIEAEIAGREAKVGLGAPDRQQEIARQQAALCATRDAL
TARWQQERALVDQLIALRARCVSEDDTALRSELDATRQQLHDLQGEEPLLFAAVDASVVA
AVVADWTGIPLGRMVKNEIDAVLNLADTLNQRVIGQRHGLDLIAKRVRTSRARLDNPNKP
VGVFMLCGPSGVGKTETALALAESLYGGEQNIITINMSEFQEAHTVSTLKGAPPGYVGYG
EGGVLTEAVRRRPYSVVLLDEIEKAHPDVHELFFQVFDKGWMEDGEGRHIDFRNTIIILT
SNVGTQLISALCADPELLPEPDALSTALRKPLLEVFPPALLGRLLVVPYYPLSDAMLAQI
VRLQLARIVRRLEENHGIAADIDDAVVSQIVQRCTEVESGGRMVDAILTNTLLPQMSQML
LSAHARDERYRRVQVRAEQGEFVCQFAV
NT seq 2607 nt   +upstreamnt  +downstreamnt
atgtcagaaatcagccgagccgtgttattcggtaaactggacacgctgttatttacctcg
ctggaaagcgccaccgccttttgcaagctgcgcggcaacccgtatgtcgagttggtgcac
tggctgcatcaactgatgcagcagcaggacggtgacttacagcaggtgatcagtcatttt
tcactggatgaaaacgcgctgacgcgggatatcgtggcggcgctcgaccgcctgccacgc
ggcgcaagtgccgtctccgatctcgccgaacacatcgacagcgccgtggagcgcgcctgg
gtgtatgcctcgctcaaatatgcggccagccgcattcgtggcggccacctgttaatcggc
atgctcaagacctacagccttgccagcgtgctgaaaggtatttcatctcagttttcacgc
attaacgtcgatgtcctgctggatcaattcgagactttactcggtcacagcaaagaggcg
cagcaggcgctgacgcagccggatgtcgccgccgctccggcagcagcaggcagcagcacc
ctggcgcaatacgcgcaggaccttaccgcgcgtgcgcgtgatggccgtatcgatccggtg
acgggacgcgatgaagagatccgccagatggtggatatcctgatgcgtcgccgccagaac
aatcccttgctgaccggtgaagccggtgtcggcaagacggcggtggtagaagggctggcc
ctgcgcattgccgccggtgatgtgcctgcgccgctgcgcgatgtgcaactctggctgctg
gatatcggcatgttgcaggccggggccgggatgaagggcgagtttgaagcgcgcctgcaa
gcgttgatcaacgaagtgcaatccagtcccacccctgttgtgttgtttgtggatgaaatc
cacaccctgattggtgccggtgggcagcaggggaccggcgacgcggcgaacctgctgaaa
ccggcactggctcgtggtcagttgcgtaccatcggtgccaccacctgggcagaatataaa
aaatacattgagaaggatccggcactgacgcgccgtttccagacggtgcaggtgcaggag
ccggatgaggccaaagccattcagatgctgcgcagcaccgtcagtgcgctggaaaaacat
catcaggtgttgctgctggatgaagcggtcagcgccgcagtcaaactgtcgcatcgttac
attccggcgcggcagttaccggataaagcggtcgcgctgctcgataccgcctgtgcgcgg
gtggcggtcagccagggggcgcaacctgcggcgctggaagattgtttacatcgtctggcg
gcgctcgacattgaagcagaaatcgccgggcgcgaggccaaagtggggctgggagcacct
gatcgccagcaggagattgcccggcagcaggctgcactgtgcgccacgcgtgatgcgctg
acagcgcgctggcagcaggagcgggcgctggtggatcaacttatcgcattgcgcgcacgt
tgcgtcagtgaagatgatacggcgctgcgcagcgaactggacgccacccggcagcagtta
catgacctgcaaggcgaagaaccgctgctgtttgccgcggtggatgccagcgtggtcgcc
gccgtggtcgccgactggaccggcatcccgctggggcgcatggtgaagaacgaaatcgat
gcggtgctgaatctggccgataccctgaaccaacgggtcattggtcagcgtcatgggctg
gatctgattgcgaaacgggttcgcacctcacgcgcgcggctggacaaccccaataaaccg
gttggcgtatttatgttgtgcggcccttctggcgtagggaaaaccgaaaccgcgctggcg
ctggccgagtcgttgtatggcggcgagcagaacatcatcaccatcaacatgagcgaattc
caggaagcgcacaccgtctcgacgctgaagggcgcaccgccgggctatgttggctatggt
gaaggtggcgtgctaaccgaagcggtgcggcgtcggccatacagcgtggtgctgctggat
gaaatcgagaaagctcacccggatgtgcatgagttgttcttccaggtgttcgacaaaggc
tggatggaagatggcgaaggacgccatatcgatttccgtaacaccattatcatcctgact
tccaatgtcggtacgcagttgatcagcgcgctgtgcgccgatcccgaactgctgccggag
ccggatgcactcagcaccgcactgcgcaagccattgctggaggtattccctccggcgctg
ctcggacgcctgctggtggtgccgtactacccattaagcgatgcgatgctggcgcaaatc
gtccggttacaactggcacgcatcgtgcgccgtctggaggagaaccacggtatcgcggca
gacatcgacgatgccgtggtcagccagatcgtgcagcgttgcaccgaggtggaatccggc
ggccgtatggtcgatgccattctcaccaataccctgttgccgcaaatgagtcagatgctg
ctcagcgcccatgcccgcgatgaacgttatcgccgggtacaggtgcgagccgagcagggc
gagtttgtttgccagtttgctgtctaa

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