Pantoea phytobeneficialis: CTZ24_16145
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Entry
CTZ24_16145 CDS
T09899
Name
(GenBank) type IV secretion protein Rhs
Organism
ppho
Pantoea phytobeneficialis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
PAAR_motif
RHS
DNase_NucA_NucB
Motif
Other DBs
NCBI-ProteinID:
QGR07869
UniProt:
A0AAP9H7T9
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Position
3485182..3489651
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AA seq
1489 aa
AA seq
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MTDYLAARIGDPLVHSSALADFVGGLVEGAIVAGIVIAAGTGVGALLGGVAIATLVFSGG
LETISNAAASLVDSLIDPGPPDAFIVSGSGNVHIKGKLAARAAGSVSRDYLNAPAAADNG
IDWAAVGMLALTGVAAAMKTALNPGAALMAVAERASHLSLDDVKDWGKNVWTSLMQPVVE
SASPYATPLPLDTVTCTKGHMVTSSNFIAQGSKKVLINNQPAARNGHKSTCEAEIKLSEN
PRVRIGGDTITVRDIHSGKNIWAYMAGNLIGGALVGILPELYRFGFSRLILRDLAKETIC
PIFGNIGMEAAVQTLHPVNIATGAKILAREEDLDFVLPDRMPLYWQRIYHSRNLATGMLG
TGWMLPFEVRLWRLPDNQLIYQDMTGRELGMGEVNPGDVIDFQQEGLKLFCSPNGAMVMQ
TSEGEHQLFEPDPTRPGEWRIHRLYDRHENVQHFSWNDEGKLVRISSDNDALDVELEYGT
HSGRLSAVYQIAAGARHLLVTYGYNDQGQLTTVTDADAIVTRRYGWDQASDMMAWHSYAT
GLTIRYQWRPAHNSRHWRVHAYQVCDERDEVLESWRIETDEQQRFARVSNDEGVSSEHHW
DALSRITAWSDPHGGDWSFDWAANSEQLLAMTQPGGARWEYAWDERGNMTMERDPLDRTR
ITTWHPLYALPLKEVLPDGALWQYDYNLAGDVVALTDPAGGVTRFEWNEQGDLTRRIDAL
ENSHQFWWDMRGQLIREEDCSGYQSQRQYDACGKLISTTDALGNTDRYQWSAAGRLQTYV
RADGRETLFKYNQAGLLCGQNIDGMLERRVTLNARGQVIEAVDPAGQVTRYDFNRAGRLV
TLTNGNRQQWHFDYTPAGLLTQQQDYAGRKTEYQYNGVQQVETLIRHPVRDSQLAPTVVN
YEYDVLGRMAARETPQHRTEYRYHALSIEIHRFSYDAWRQAIINECEPTGAEVMVFQRDP
LGRLVSEQNHSGEYRHQYDALGNLSASVYPDGREMQYLRYGTGHLLEMQLTLGGRTHALA
GYQRDRLHRETHRTQGELELETQYDIAGRITQRRSVDNLRQRLVSERRYQWDRADQIIRQ
IVTDGAPSSPAEKYSQSLWGYDAAGRMTRSIQPGGEERFWYDAADNRTSEDLHPVWDNLL
KRLEGIRWEYDGFGRITERHDSQRGIVQHFSYDDEHRICEVLIEGDAEYTRAQYQYDALG
RRIGKQVWRRNAVQPECTHYAWSGMQMVGEHSDSKPEAAVQYVYAENSYEPIARIDSYQQ
HAEVYWYHTEINGLPDRVTNNCGDTVWQGVFSAWGRTTRERTGVDWDVPQNLRFQGQYLD
RETGLHYNTFRYYDPCGGRYTQLDPIGLAGGLNNYTYVTDPIGWVDPMGWKGCSVREGDG
VTHDIVLVLTHKEYKQTFGHIKDVIFSDKRDIFTIDRASASINRAESLKGIPTLKGYDRD
EFPMAMFREGGKGASVRYIDPSDNRGAGSSIANALKPFPDGTKVKIVVE
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atgacagattatctcgcggcgcgtatcggcgatccgctggtgcacagttcggcgctggcg
gattttgtcggcggcctggtggaaggcgcgattgtcgctggcatcgtgatcgccgccgga
accggcgttggtgcgctgctgggtggcgtagcaatagctacgctggtgttcagtggcggc
ctggagacgatcagcaatgcggcggcgtcactggtcgacagccttattgaccccggaccg
ccggatgcgtttattgtcagcggatccggcaacgtccatatcaaagggaagctggcggcg
cgcgcggcgggtagcgtgtcgcgcgattatcttaatgcgccagcggcggctgacaatggc
atcgattgggcggcggtaggcatgctggcgctgaccggcgtggcggcggcaatgaagacc
gcgcttaaccccggtgccgcgctgatggcggtagccgagcgagccagtcatctctcactg
gatgatgttaaggattggggtaaaaacgtctggaccagcctgatgcagccggtggtggag
agcgccagtccgtatgcgactccgctgccgctcgataccgtgacctgcaccaaaggtcat
atggtcaccagcagcaattttattgcgcagggttcgaaaaaggtactgatcaacaatcaa
cccgccgcacgtaacggacacaaaagtacctgcgaagcggaaatcaaactgagtgaaaat
ccgcgggtgcgcatcggtggcgataccattacggttcgtgacatccacagcggtaaaaat
atctgggcgtacatggcggggaacctgatcggcggtgcgctggtgggtatcctgccggag
ctgtaccgctttggcttcagccgcttgattttgcgcgatctggcaaaagaaacgatctgc
ccgattttcggcaacattggcatggaagccgctgtccagaccttacacccggtaaatatc
gccaccggggccaaaatcctcgcacgcgaagaggatctcgattttgtcctgccggatcgt
atgccgctctactggcagcgtatctaccacagccgcaatctggctaccggtatgctcggt
actggctggatgctgccgtttgaagttcgcctctggcgcttgccggataatcaactgatc
taccaggacatgaccggacgcgagctgggcatgggggaggtcaaccctggcgatgtgatt
gatttccagcaggaggggctgaagctgttttgcagcccgaatggcgcgatggtgatgcag
accagcgaaggtgagcatcagttgtttgagccggatccaacgcgaccgggcgagtggcgc
atccatcgtctctatgaccgccacgaaaacgtacagcattttagctggaatgatgaaggc
aaactggttcgtatctccagcgataacgacgcgctggatgtggaactggaatatggcacg
cattccgggcgtctgagcgcggtttaccagattgcggcaggggcacgtcatctgctggtt
acctacggttataacgaccaggggcaactgacgaccgtgacggacgccgacgctatcgtc
actcgtcgctacggctgggatcaggcgagcgatatgatggcatggcacagctatgcgacc
gggctaacgatccggtatcagtggcggcctgcacacaactcacggcactggcgcgtccat
gcgtatcaggtgtgcgacgaacgggatgaggtgctggagagctggcgcattgagacagat
gagcagcagcgctttgcgcgtgtcagcaatgatgaaggcgttagcagcgagcaccactgg
gacgccctcagccgtattaccgcctggagcgacccacacggtggagactggtcgttcgac
tgggcggcgaacagcgaacagctgctggcgatgacgcagccaggcggtgcacgctgggaa
tacgcctgggatgaacgcggtaatatgacgatggagcgcgacccactggatcgcacccgc
atcaccacctggcatccgctgtacgcgctgccgctcaaggaggtactgccggacggcgca
ttgtggcaatacgactacaatctggcgggtgatgtggtcgcgttgaccgatcccgcaggc
ggcgttacccgttttgaatggaatgaacagggcgatctgacgcgacgtatcgatgcgctg
gaaaacagccatcaattctggtgggacatgcgcgggcagttgatccgtgaagaggactgc
tcgggctatcaaagccagcggcagtacgatgcctgtggaaaattgatcagcactaccgat
gcactgggtaacaccgatcgctaccagtggagcgcagcgggacgcctgcaaacctatgtt
cgcgccgacgggcgggaaacgctgtttaagtacaaccaggccgggttgctatgcggtcag
aatattgatggcatgctggaacgcagggtaacgctcaatgcgcgcggtcaggtgattgag
gcggttgatcccgccggacaggtgactcgctatgacttcaaccgggccggacggttggtg
acactaaccaacggcaaccgacagcagtggcattttgactacacgccagccggactgctc
acgcagcagcaggactacgccggacgtaaaaccgaataccagtacaacggcgtgcagcag
gtggagacgttgatccgtcaccctgtgcgcgacagtcaactggcaccaacggtggtgaat
tatgaatacgatgttctgggcaggatggcggcgcgcgaaacgccgcagcaccgcaccgag
tatcgctaccatgctctgagcatcgagatccaccgcttctcatacgatgcatggcgccag
gccatcatcaacgagtgtgaaccgactggcgcggaagtgatggtattccaacgcgacccg
ttaggtcggctggtcagtgaacagaatcattctggcgaatatcgccaccagtatgatgcg
ctgggcaacctgagcgcttctgtgtaccccgatgggcgtgaaatgcagtacctgcgctat
ggtaccggtcatctgttggagatgcagttaacgttaggtgggcgtacgcatgcgctggcg
ggctatcagcgtgaccgtctgcatcgcgaaacgcatcgcacccagggtgaactggaactg
gagacgcagtacgacattgccgggcgcattacccagcgtcgcagcgtcgataatttgcgc
cagcggctggtgtcggaacggcgttatcagtgggatcgcgctgaccaaatcattcgccag
attgtcaccgatggcgcaccttccagcccggcagaaaaatacagtcagtctttatggggc
tatgatgccgcaggcagaatgacgcgcagcattcagccgggcggcgaggaacgtttctgg
tatgacgcggcggataaccgcaccagcgaagatctgcatccggtgtgggataacctgttg
aagcgcctggaaggcattcgctgggaatacgacggttttggtcgtataaccgaacgacat
gatagccagcgcggcattgtgcagcattttagttacgacgatgaacaccgcatttgcgag
gtgttgattgagggggatgccgaatatacccgcgcgcagtatcagtacgatgcgctgggc
cgtcgcatcggcaagcaggtgtggcggcgcaatgcggtgcagcccgaatgcacgcattac
gcgtggtccggcatgcagatggtgggtgagcacagcgacagcaaacccgaagctgcggtg
cagtatgtctatgctgaaaacagctacgaaccgatagcgcgcatcgacagttatcagcaa
cacgctgaggtttactggtatcacaccgagatcaatgggttgccagaccgggtgacaaat
aattgcggtgacactgtctggcagggggtgttttccgcctggggacgcaccacacgagaa
cgcactggtgttgactgggatgtgccgcagaacctgcgcttccaggggcagtaccttgac
cgcgaaaccggtctgcactataacactttccggtactatgacccgtgcggcgggcgttac
acccagttggacccgatagggttagcgggtggattgaataattatacttacgtgacagac
cctataggttgggtagatcctatgggttggaaaggatgtagtgtccgtgagggagatggc
gttactcacgatatcgtgctggtacttactcataaagaatacaagcaaacattcggtcat
attaaagatgttattttcagtgataaacgcgatatattcactatagatagagcatctgcc
agcataaacagagctgaatcgcttaaaggaatccctaccttaaaaggatatgaccgagat
gagttcccaatggcgatgttcagagagggggggaaaggtgcaagtgtgcggtacattgat
ccaagtgataaccgaggtgcgggctcttcaatagcaaatgccttaaaaccgttccctgat
ggtactaaagtaaaaattgtcgttgaataa
DBGET
integrated database retrieval system
