KEGG   Pantoea phytobeneficialis: CTZ24_17015
Entry
CTZ24_17015       CDS       T09899                                 
Symbol
icmF
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
ppho  Pantoea phytobeneficialis
Pathway
ppho03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppho00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CTZ24_17015 (icmF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppho02044]
    CTZ24_17015 (icmF)
Secretion system [BR:ppho02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CTZ24_17015 (icmF)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related VP16-like nSTAND3 AAA_28
Other DBs
NCBI-ProteinID: QGR08778
UniProt: A0AAP9H8Q8
LinkDB
Position
complement(3672947..3675061)
AA seq 704 aa
MRASLQHLLTHRLLWSFIGITALSCVLWILGPLWSWGDTRPLEPLLPRQLVVGLLYFCWV
LFQFIPAIWRAWFNSKLLTRLQQVSSEELSDRQMTETLLTQRFSEAAQRLKRTQFGRRQR
QGWLARFQSHYLYQLPWYVIIGAPGAGKTTALLNAGLEFPLTDSLGNAAVRGVGGTRHCD
WWFTDSAVLIDTAGRYALQESQRARDASEWHNFIQLLKRYRTRQPINGVIMTISVADLLT
DSAEARHAQATALRQRMVELHQQTGIHFPVYVMVTKTDLLKGFMSFYGGLNKQQRDAIWG
FTFPWEPGKPHKDDWHRSFSQQYHLLEQRLHQQLAGVMAQDRDLTQRADSFLFPQEFSSL
RPLLNEYLDVVFSGHQDAVAWSARGLFFTSGTQEGLPFDRIMGELNRKLQLPQAGQHTIA
AWDSVNRSSPIPGTRGQSFFIRNLLSDLVFRESGLAGSNRHWEYRNRLFHWIGYGVLTGA
LLLLSCLWLASYLQNQRYLDQVAARIAPITQQSQQVIHQPADNIFDLLPFLNNLVKLPLS
DRFSLDNPPLTMRVGLYRGNQVSDAAWVLYQNALKSLLLPRVAQQITNLLRDDPGTDNEY
SRNALRAYQMLYQPRNYDGEFLRGWLMQNLQRTLPDNVSARDLQQLDWHLSQLLDQQIQS
SPYARDNALMMRKLAENLKNAGQNGNTLTLAPLNAAQRLTGHSE
NT seq 2115 nt   +upstreamnt  +downstreamnt
atgcgcgcatcacttcagcatttattaacgcaccgtctgctgtggagttttattggcatc
actgcactgagctgcgtgttgtggattctcggcccactgtggagctggggcgatacccga
ccactcgaacccttattgccacggcaactggtagtgggattgctctatttttgttgggta
ctgttccagtttatccctgccatctggcgtgcctggtttaacagcaaacttttgacccgc
ttgcagcaagtcagcagcgaggagctttccgatcgccagatgacggagacgctgctgact
caacgatttagcgaagcagcccaacggctgaaacgcacccaatttggccgccgtcagcgg
caaggctggttggcgcgcttccagagtcactatctctatcagctaccgtggtacgtcatt
attggcgcgcctggtgccgggaaaaccaccgcgttgctcaatgccggactggagtttccc
ctcaccgacagtctcggcaatgccgctgtacgcggggttggcggtacacgtcattgtgac
tggtggtttacggacagtgcagtgctgattgataccgctggccggtatgcgttgcaggaa
agccaacgggcacgcgatgccagcgaatggcataacttcatccagttgttgaagcgttac
cgtacccggcaacccatcaatggcgtgatcatgaccatcagcgtggccgatctgctgacc
gactccgccgaagcacgccacgcgcaggccaccgcgttacgccagcggatggtggaattg
caccagcaaaccggcatccactttccggtatacgtgatggtgacgaaaaccgatctgttg
aaaggttttatgagtttctatggtggcctgaataaacagcaacgcgatgctatctggggt
tttacctttccctgggaaccgggtaaaccacacaaggatgactggcaccgcagcttcagc
caacaatatcatctgctcgaacagcgcctgcatcagcagctggcaggtgtgatggcgcag
gatcgcgacctgacccagcgcgccgatagcttcctgtttccacaggaattcagctcgttg
cgtcccttgctgaacgagtaccttgatgtggtattttccggccatcaggacgccgtggcc
tggtcggcacgcggcctgtttttcaccagcggcacccaggaaggcttgccttttgatcgc
attatgggcgagctaaaccgcaaacttcagttgccgcaagcaggccagcacaccatcgcc
gcctgggatagcgtcaatcgcagcagcccaatccccggcacgcgtgggcaaagcttcttt
attcgcaacctgttgagcgatttagtgtttcgggagagcggtctggcaggcagcaaccgt
cactgggagtaccgcaatcgcttgttccactggattggctatggcgtgttgaccggcgct
ttgctgctgctttcctgcctgtggctcgccagctatctccagaatcagcgctatcttgat
caggtcgccgcacgtatcgcaccgatcacccagcagagccagcaagttattcatcagcct
gcggataatatttttgatctgctacccttcttaaataatctggtgaagttgccgctttcg
gatcgcttttccctcgataatcctccgctaaccatgcgtgtcggcttgtatcgcggtaat
caggtaagcgatgcagcttgggtgctttatcaaaacgcccttaagtctttattactgccg
cgcgtggcccagcagatcaccaatctgctgcgcgacgatcccggtactgataatgaatac
agccgtaatgcgctccgggcctatcagatgctgtatcagccacgcaattatgatggcgag
tttttgcgtggctggctgatgcaaaatctgcaacgcaccctgccggataacgtcagtgca
cgcgatttacagcagctggactggcacctcagtcaattgctggatcagcagattcagtct
tcgccttatgcccgcgacaacgcactgatgatgcgtaagcttgcggaaaatctgaaaaat
gccggtcagaacggcaatacgctgacgctcgcaccgttaaacgctgcacagcgattgacc
ggacacagtgagtaa

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