Pantoea phytobeneficialis: CTZ24_18125
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Entry
CTZ24_18125 CDS
T09899
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ppho
Pantoea phytobeneficialis
Pathway
ppho03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppho00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CTZ24_18125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppho03019
]
CTZ24_18125
03009 Ribosome biogenesis [BR:
ppho03009
]
CTZ24_18125
Messenger RNA biogenesis [BR:
ppho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CTZ24_18125
Ribosome biogenesis [BR:
ppho03009
]
Eukaryotic type
Pre-60S particles
RNases
CTZ24_18125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF8174
Motif
Other DBs
NCBI-ProteinID:
QGR08234
UniProt:
A0AAP9KQN9
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All DBs
Position
complement(3900270..3900818)
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AA seq
182 aa
AA seq
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MTAGNENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVMAVHQSDAQLALMD
DWNVRTHTNSGLVDRVKASQFDDRAAELATIEFLQQWVPANTSPICGNSIGQDRRFLFKY
MPELEAYFHYRYLDVSTLKELARRWKPDILPGFKKSGSHQALDDIRESVAELAYYREHFL
QL
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgacagctggaaatgaaaataatctgatttggatcgacctcgaaatgaccgggctggat
ccagaacgcgatcgcatcattgagatcgctacgctggtaacggatgccaatctgaatatt
ctggcggaagggccggtgatggcggtacatcagtccgatgcgcagttggcgctgatggat
gactggaatgtgcgtacccataccaacagcggtctggtggatcgcgtgaaggccagccag
tttgacgatcgtgccgcagaactggcgactatcgaatttttgcaacagtgggtgcctgct
aatacctcgccgatttgtggcaacagcatcggtcaggatcgtcgcttcctgttcaaatat
atgccggagctggaggcttatttccactaccgttatctcgatgtcagtaccctgaaagag
ttggcgcgtcgctggaagccagacatcctgccaggcttcaaaaaaagcggcagccatcag
gcattggatgatatccgcgagtccgtggcggaactggcgtattaccgcgagcattttttg
cagctttaa
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