Pantoea phytobeneficialis: CTZ24_18380
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Entry
CTZ24_18380 CDS
T09899
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
ppho
Pantoea phytobeneficialis
Brite
KEGG Orthology (KO) [BR:
ppho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppho03009
]
CTZ24_18380
Enzymes [BR:
ppho01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
CTZ24_18380
Ribosome biogenesis [BR:
ppho03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CTZ24_18380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
Methyltransf_31
Methyltransf_37
FtsJ
MTS
Methyltransf_5
Cons_hypoth95
Methyltransf_12
Methyltransf_11
Methyltransf_15
DUF4426
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
QGR08278
LinkDB
All DBs
Position
3948723..3950009
Genome browser
AA seq
428 aa
AA seq
DB search
MKKNTNLRSLAAQLIERVVDKGESLSAILPGAQKNLSDKDGALLQELCFGVMRTLPQLEA
LIGKLMERPLTGKQRVLHYLIMVGLYQLLYTRVPPHAALAETVAGAEELKRANLKGLLNG
VLRQFQRQQETLVAEVDQGTQRYLHPGWLLKRLQTAWPEQWQQIVEANNQRPPMWLRVNR
QHHARDAWLALLEATEKHAFAGDAPDALRLEAPTAVGQLPGFEQGWVTVQDLSAQRCALL
LEPQDGESILDLCAAPGGKTTHILEIAPQANVLAVDVDEQRLTRVRENLQRLGMQADVRQ
GDGRTPADWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIAELASLQQEILNAVW
PRLKRGGTLLYATCSVLPEENHQQISAFLAAHPDAIAEALPQGQDNGWQVFPATDGGDGF
FYAKLMKK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaacacaaacctgcgtagcctcgccgcgcaattaattgaacgcgtagtggat
aagggcgaatcgctcagcgccattttgcccggcgcacagaaaaatctgtccgataaggac
ggggcgctgctacaggaactctgctttggtgtaatgcgtaccctaccgcagctcgaagca
ttgattggcaagctgatggagcggcctttaacaggtaagcagcgtgttcttcattatctg
atcatggtaggcctgtatcagttgctttatacccgcgtccctccgcatgccgcactggct
gagaccgtggctggcgcggaagagctaaaacgcgcaaacctgaaaggcttgctgaatggt
gtgctgcgccagtttcaacggcagcaggaaacgttggttgcagaagttgatcagggtacg
caacgttatttacatccgggttggttgctcaaacgtttacaaaccgcatggcccgaacaa
tggcagcagattgtcgaagccaacaatcagcgtccaccgatgtggttgcgcgtcaaccgt
caacatcacgcccgtgatgcctggttggcactgcttgaagcgacagaaaaacatgccttc
gccggagatgctccggatgcccttcgcctggaagcgccaaccgcagtcggccaactgcct
ggtttcgagcagggttgggtaacggtacaggatttatccgcacaacgctgtgctttgctg
cttgaaccacaagatggcgaatcgattcttgacctgtgtgctgcgcctggcggcaaaacc
acccatatccttgaaattgcaccgcaggcgaacgtgctggccgtcgatgttgatgaacaa
cgtctgacgcgcgtgagagaaaacctgcaacgtctcggcatgcaggcggatgtgcgtcag
ggtgatgggcgaacgccagctgactggtgtggtgagcaacaatttgaccgtatcctgctg
gatgcaccctgctcggcaacgggtgtgatccgccgccatcccgatatcaaatggctgcga
cgcgatcgtgatatcgctgagctggccagcctacaacaggaaatcctcaacgcagtctgg
cctcggctgaagcgtggcggcacgttgctttatgcaacctgttcagttctgccggaagag
aatcatcagcaaatcagtgctttcctggcagcacatcccgatgccattgcagaagcgctg
ccgcaaggtcaggataatggatggcaggtgtttcctgcgacagatggcggggatggtttc
ttctacgctaagctgatgaaaaaatag
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