Pantoea phytobeneficialis: CTZ24_19650
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Entry
CTZ24_19650 CDS
T09899
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ppho
Pantoea phytobeneficialis
Pathway
ppho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CTZ24_19650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppho03400
]
CTZ24_19650
Enzymes [BR:
ppho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CTZ24_19650
DNA repair and recombination proteins [BR:
ppho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CTZ24_19650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA-like_WH
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_22
AAA_19
Zn_ribbon_6
TrwB_AAD_bind
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
QGR08806
UniProt:
A0AAP9H9K9
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All DBs
Position
4205760..4207958
Genome browser
AA seq
732 aa
AA seq
DB search
MPVVQVALPVPLPRLFDYLLPADAPLPVTGVRVSVPFGNRKMVGIVVGIRETSDLPLTQL
KQIDELLDDSSLYSPALWRILQWAAQYYHSPLGEVLNHALPVLLRLGKPAQEAPLWQWVI
NDAGREVALDSLKRARKQQQALAALRQQPLYRHQIGDHDLTDAALQALRAKGLCDLREHA
APLHDWRDTFAVKGERLRLNTDQAMAVGAIRSEDDRYAAWLLAGITGSGKTEVYLSVLEN
VLARGKQALVLVPEIGLTPQTIARFRERFDAPIDVLHSALNDSERLAVWLRARSGETAIV
IGTRSALFTPLARPGVIIIDEEHDSSYKQQEGWRYQARDLAVFRAHEEDIPIVMGSATPA
LETLHNVRNGKYRQLNLTKRAGNAKPALQQLIDLKGQQLKGGLAPALLGKMRQHLQANNQ
VLLFLNRRGFSPALMCHDCGWLAECQRCDRYYTLHQHHRQLRCHHCDSQRPLPHQCPQCG
STHLMPVGVGTEQLEQQLGTLFPGVPVSRIDRDTTSRKGALEQHLADVHRGGARILVGTQ
MLAKGHHFPDVTLVSLLDVDGALFSADFRAAERFAQLYTQVAGRAGRAGKQGEVLLQTHH
PEHPLLQTLLHRGYFAFAEQALLERQSVHLPPWTSHALFRAEDMDNQQAAEFLNQLRNLI
EASPLKDQALWLMGPVPALQPKRSGRWRWQLLLQHPSRKRLQQLLSSSLPLLSTLPAARK
VKWTLDIDPTES
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgttcaggttgccctgcccgttccgctgcctcgcctgtttgactacctgctg
cctgccgatgcaccgctgccggtgacaggcgtgcgcgtcagtgtgccattcggcaaccgg
aaaatggtgggcattgtggtcggcatacgcgaaaccagcgacctgcccctgacacaacta
aagcagattgatgaattgctggatgacagcagcctctattcacccgcgctgtggcgcatt
ttgcagtgggcagcgcagtattatcactccccgttgggcgaagtgttgaaccatgccttg
ccggtgctgttgcgcctgggcaaacctgcgcaggaagccccgctgtggcaatgggtaatc
aatgacgccgggcgtgaagtggcgctggatagcctgaaacgcgcccgcaaacagcagcag
gcgctggcggcactgcgccagcagccactctatcgtcatcagattggcgaccacgatctc
accgatgcggccttgcaggcactacgtgccaaaggcttgtgtgatctgcgtgagcacgct
gcgccattacacgactggcgggacacgtttgccgttaaaggggagaggctgcggcttaac
accgatcaggccatggcggtcggcgcgattcgcagcgaagacgatcgctatgctgcctgg
ttgctggccgggatcaccggctcagggaagacggaggtctacctgagcgtgctggaaaac
gtgctggcgcgcggtaaacaggcgttggtactggtgccggaaattggcctgacgccgcaa
accatcgcccgctttcgtgaacgtttcgatgcgccgattgatgtgctgcactcggcgctg
aatgacagcgagcgcctcgccgtttggctgcgggcgcgcagtggtgaaaccgcgattgtg
attggcacacgatcggcgctgtttacgccgctggcacgtcccggcgtgatcattattgat
gaagagcacgacagttcctataaacagcaggaaggctggcgttatcaggcgcgcgacctg
gcggtgtttcgcgcccatgaggaagatatcccgattgtaatgggatcggccacgcccgcg
ctggaaacgctgcacaacgtgcgcaacggcaaatatcgtcagctcaacctcaccaaacgc
gccggtaacgctaaaccggcgttgcagcaattgattgatctgaaaggacaacaactgaaa
ggcggtctggccccagccctgctgggcaaaatgcgtcagcatttacaggcaaataatcag
gtactgttgttcctcaaccgccggggcttctcaccggccctgatgtgccacgactgtggt
tggctagccgagtgtcaacgctgcgatcgctactacacgctgcatcagcaccatcgtcag
ctgcgttgccaccattgcgacagtcaacgcccgttgccgcatcagtgcccacaatgtgga
tcaacccacttgatgccggtgggtgtcggaaccgagcagttagaacagcagctcggtacg
ctatttcccggcgtgccggtgtcccgcatcgatcgtgataccaccagccgcaaaggcgcg
ctggagcaacacctggcggatgtgcatcgcggtggcgcacgcattctggtcggcacgcag
atgctggcaaaaggccaccatttcccggatgttacgctggtttcgttgttagatgttgat
ggcgcgctgttctccgccgatttccgcgccgctgaacgtttcgcacagctctatactcag
gttgcaggccgcgcgggccgtgcaggtaaacagggagaagtgctgttgcagacgcaccac
ccggaacatccgctgctgcaaaccctgttgcatcgtggttattttgcctttgccgagcag
gcgctactggagcgtcagtctgtgcatctaccgccgtggaccagccatgcgctatttcgc
gccgaagatatggataaccagcaggccgccgagtttctcaatcagttacgtaacctgatc
gaggccagcccgttgaaagatcaggcgctgtggctgatgggacccgttccggcgctgcaa
cccaagcgcagtggccgctggcgttggcagctgttgctgcaacacccatcgcgcaaacgg
ctgcaacagctgctgagtagctcgctgccactgctctcaacgttacccgccgcccgcaaa
gtcaaatggacgctggatattgacccgactgagagctga
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