Pantoea phytobeneficialis: CTZ24_19970
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Entry
CTZ24_19970 CDS
T09899
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
ppho
Pantoea phytobeneficialis
Pathway
ppho03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppho00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CTZ24_19970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppho03021
]
CTZ24_19970
03400 DNA repair and recombination proteins [BR:
ppho03400
]
CTZ24_19970
Enzymes [BR:
ppho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CTZ24_19970
Transcription machinery [BR:
ppho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CTZ24_19970
DNA repair and recombination proteins [BR:
ppho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CTZ24_19970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
QGR08578
UniProt:
A0AAP9KR42
LinkDB
All DBs
Position
4267352..4267627
Genome browser
AA seq
91 aa
AA seq
DB search
MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKATVIALREIEEGLIT
NQILDVRDRQEQQEQEAAELQAVTAIAEGRR
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaaccgttcaggacgcagtagaaaaaattggtaaccgttttgacctggtg
ttggtcgctgcacgtcgtgcacgtcagatgcaggtaggcggcaaagatccgctggttccg
gaagaaaacgataaagccaccgttatcgcgctgcgcgaaatcgaagaaggtctgatcacc
aaccagattctggatgtgcgtgatcgtcaggaacagcaagagcaggaagccgctgaatta
caagccgttaccgctatcgctgaaggtcgtcgttaa
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