Pantoea phytobeneficialis: CTZ24_20075
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Entry
CTZ24_20075 CDS
T09899
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ppho
Pantoea phytobeneficialis
Pathway
ppho03030
DNA replication
ppho03410
Base excision repair
ppho03420
Nucleotide excision repair
ppho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CTZ24_20075
03410 Base excision repair
CTZ24_20075
03420 Nucleotide excision repair
CTZ24_20075
03440 Homologous recombination
CTZ24_20075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppho03032
]
CTZ24_20075
03400 DNA repair and recombination proteins [BR:
ppho03400
]
CTZ24_20075
Enzymes [BR:
ppho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CTZ24_20075
DNA replication proteins [BR:
ppho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CTZ24_20075
DNA repair and recombination proteins [BR:
ppho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CTZ24_20075
NER (nucleotide excision repair)
GGR (global genome repair) factors
CTZ24_20075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QGR08596
UniProt:
A0AAP9H946
LinkDB
All DBs
Position
complement(4291052..4293838)
Genome browser
AA seq
928 aa
AA seq
DB search
MAHIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLKSLLMQYQPSHVAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHEMVKAMGLPLLAVTGVEADDVIGT
LALEAEKQGLAVLISTGDKDMAQLVTPGITLINTMTNTVLGPEEVEQKYGVPPSLIIDFL
AMMGDSSDNIPGVPGVGEKTAQALLQGLGGMQSIYDNLEKVADLSFRGAKTMAAKLEQNR
DVAFLSYQLATIKTDVELELGCEQLTVNDPDVAVLQTLFSRYEFKRWLVDLQEGKWLQGK
KGNAQTPQALPDQPVAEAETASVLSSDGYVTILDQDTFASWLDKLKTSELFAFDLETDSL
DTLSANIVGIAFAVAPGEAAYLPVAHDYLDAPDQLDRAEVLAQLKPLLEDSNAAKVGQNL
KYDRGVLKNYDIELNGIKYDTMLESYCLNSVGGKHDMDSLAARWLNHKTVTFEEIAGKGK
NQLTFNQIAIEQAGHYAAEDADVTLQLHLKMWPELEKEAGPKKVFTEIEIPLLKVISRVE
RNGVLIDQNILAKHSQELTTRLAELEQQAHELAGEPFNLSSTKQLQTILFEKQGIKPTKK
TPGGAPSTSEEVLAELALDYPLPKVILEHRGLSKLKSTYTDKLPLMINPVTGRVHTSYHQ
AVTATGRLSSTDPNLQNIPVRNDEGRRIRQAFIAGPDKRIVAADYSQIELRIMAHLSQDK
GLLDAFAQGEDIHRATAAEVFGVALSKVSGEQRRSAKAINFGLIYGMSAFGLSRQLNIGA
GEAKKYMDLYFERYPGVLRYMEETRELAAEKGYVETLDGRRLWLPDITSSNAIRRKAAER
AAINAPMQGTAADIIKRAMIAVDGWLLQQNDDNVKMIMQVHDELVFEIHQDAVDSASDKI
RQLMESSMKLDVPLQVEVGTGENWDQAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacattgcagaaaatcccctgattctggtagacggatcctcctatctctaccgt
gcatatcatgcctttccgcccctgaccaacagcgcaggcgagccaactggcgccatgtat
ggtgttctcaacatgttgaaaagcctgttgatgcagtaccaacccagccatgttgctgtg
gtcttcgatgcgaaaggaaaaacattccgcgatgagttgttcgagcactacaagtcacac
cgcccccctatgcctgacgacctgcgtgcgcagatcgaaccgctccatgaaatggttaaa
gcaatgggcttgccactgctggcggtaaccggtgtggaggcggacgacgtcatcggcacg
ctggcacttgaagcagaaaagcagggactagcggtactgatcagtaccggtgataaggat
atggcccaattggtcacgcctggcatcacgctgatcaacaccatgaccaatacggtgctc
gggccagaagaggttgagcagaaatatggtgtgccaccctcactgattatcgatttcctc
gccatgatgggtgacagctcggacaacattcctggcgtacccggcgtgggtgaaaagact
gcgcaggctctgctgcaagggctgggtggcatgcagtctatctatgacaacctggaaaaa
gtggccgacctgtcatttcgtggtgccaaaacgatggcggcgaaactggaacagaatcgt
gacgtggcattcctttcttatcagctggcaaccattaaaaccgacgtagaactggaactc
ggctgtgagcagctgacggtgaatgatccggatgtcgccgtactacagacgctattcagc
cggtatgaattcaagcgctggctggtcgatctgcaagaaggaaaatggttgcagggcaaa
aagggtaacgcgcagacaccgcaagcactgccggatcagcctgtggccgaagccgaaacg
gcgagcgtgttgtcatctgatggttatgtcaccattctggatcaagatacctttgcgagt
tggttagacaagctgaaaacaagcgagctgtttgctttcgatctggaaaccgattcgctg
gataccctgagtgccaacattgtgggtatcgccttcgctgtggctccaggtgaagctgcc
tatctgccggtggcccatgattatcttgatgctcctgatcagctggacagagctgaagta
ctggctcaactgaaacctttgctggaagacagcaacgccgccaaagtcgggcaaaatctc
aaatacgatcgcggcgttctgaagaactatgacatcgagctgaacggtattaaatacgac
accatgctggagtcatattgtctgaacagcgtgggtgggaagcacgatatggacagcctc
gcagcgcgctggctgaatcataaaaccgtcacctttgaagagattgccgggaaaggtaaa
aatcaactgacctttaaccagattgccatcgagcaggcagggcattacgccgcagaagat
gcggatgtcaccttgcagttgcatctgaaaatgtggccggagctggagaaagaagcgggt
ccgaaaaaagtcttcacagagatcgagataccgctgctgaaggtgatctcccgtgtagaa
cgcaatggcgtgttaattgatcagaacatcctggcaaaacattcccaggagctaacaaca
cgtctggctgagctggagcagcaagcgcacgagctggcgggtgagccgttcaacctctct
tcaaccaaacagttgcaaaccattctgtttgaaaagcaggggatcaaaccgacgaagaaa
accccgggtggcgcgccatcaaccagtgaagaagtgttggcggagttggcgctcgattat
ccgttgccgaaggtgatactggaacatcgtggtttgtcgaagttgaaatcaacttatacc
gataaattgccgctgatgatcaacccggtcaccggtcgagtgcacacttcataccaccag
gcggttacggcaaccggtcgtttgtcatccaccgatcccaacctgcaaaatatcccggta
cgcaacgatgaaggacggcgtattcgccaggcgtttattgccggaccggataagcgcatt
gtcgcggcggactactcacagattgagctgcgtattatggcgcatctgtcgcaggataag
gggctgctggacgcttttgcgcaaggggaggacattcaccgtgctaccgcagcagaagtg
tttggagtggcgctgagtaaggtttctggtgaacagcgccgtagcgcgaaagcgatcaac
tttggtttgatctacgggatgagtgcatttggcttgtcgcgccagctgaatatcggtgcc
ggtgaagcgaaaaagtatatggatctctactttgaacgctatccgggcgtattgcgttac
atggaagagacacgggagctggcggcggagaaaggctatgttgagaccctggatggtcgt
cgcttgtggctgccggacatcacctccagcaacgcgattcgccgtaaagcagcagagcgt
gcggcgatcaacgccccgatgcagggaacggcggcggatattatcaagcgtgcgatgatt
gcggtggatggttggttactgcaacaaaatgacgacaacgtcaaaatgatcatgcaggtg
cacgatgaattggtgtttgagattcatcaggacgcggtggacagcgccagcgacaagatc
cgtcaattgatggagagcagcatgaagttggacgttccgttgcaggttgaggtcggtacc
ggcgaaaactgggaccaggcacactaa
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