Pantoea phytobeneficialis: CTZ24_22855
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Entry
CTZ24_22855 CDS
T09899
Name
(GenBank) IclR family transcriptional regulator
KO
K20539
IclR family transcriptional regulator, blcABC operon repressor
Organism
ppho
Pantoea phytobeneficialis
Pathway
ppho02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppho00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CTZ24_22855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppho03000
]
CTZ24_22855
Transcription factors [BR:
ppho03000
]
Prokaryotic type
Helix-turn-helix
IclR family
CTZ24_22855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_20
Dimerisation
HTH_5
HTH_27
DUF4423
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QGR09289
UniProt:
A0AAP9HA13
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All DBs
Position
pMSR2A:complement(554703..555503)
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AA seq
266 aa
AA seq
DB search
MSGDSVTKSDQTRKNIDTVPALRRAVTILDLVAAQGGALSAADITRQLALPKSTAHGQLN
VLTELGLLVRTADGAFRLGPHLMRWADGFLSQMDIVALFREYFASDSELAGYTITLTVLD
RDEVVYISCRNSEKPLGHTFRIGMRLPAPFTATGKMLLSELPDDALAALFANGFPQPMTA
AGVSNLDELRQELIAIRARHFSIDNGQIHAAMTCVGAAIYDHTGKAIAGIATSFLSSEAR
TGLVESLGEKMREAALALSCQCGYQG
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggggattccgtaacaaaaagcgatcaaacgcgcaaaaatattgatactgttcct
gcactgcgtcgggcggtgaccattcttgatctggtcgccgcgcagggcggcgcactctcc
gcggcggatatcacgcgtcaactggccctgccaaaaagtaccgcgcatgggcagttgaat
gtcctgacggaactggggctgttagtcaggaccgccgatggagcgttccgcctcggaccg
catctgatgcgctgggcagacggttttttgtcacagatggatatcgtggcgctgttccgg
gaatactttgccagcgacagcgagctggctggctataccatcacgctgactgtgctcgac
cgcgatgaagtggtctacatcagttgccgaaattcagaaaaacccctcggtcatacgttc
cgtattggtatgcggttgcctgccccttttaccgccaccggcaagatgttgctttccgaa
ctgcccgacgacgcgctggcggcattgttcgcgaacggtttccctcagcccatgacagct
gccggcgtgagtaaccttgatgagttgcgccaggagttgatcgcgatccgcgcgcgccat
ttttcgattgataacggtcagattcacgccgcgatgacctgcgttggcgcagcgatttac
gatcataccggcaaggcgattgcgggcatcgctaccagttttctcagcagcgaagcccgg
acggggttggttgaaagtttgggtgaaaagatgcgggaagcggcattggcgctttcatgc
cagtgtggatatcaggggtga
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