KEGG   Pantoea phytobeneficialis: CTZ24_23670
Entry
CTZ24_23670       CDS       T09899                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppho  Pantoea phytobeneficialis
Pathway
ppho02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ppho00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CTZ24_23670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppho03021]
    CTZ24_23670
Transcription machinery [BR:ppho03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CTZ24_23670
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 PhyR_sigma-like HTH_Tnp_4 Sigma70_ECF HTH_11 TnsD HAC6_helical HTH_24 GST_C_3
Other DBs
NCBI-ProteinID: QGR09475
LinkDB
Position
pMSR2B:complement(69661..70182)
AA seq 173 aa
MLPAAESPAAPSLALFYATNHRWLKHWLTGKLRSAFDADDVAQDTFLRVMSGHHLSDIRD
AKSFLCTLAKRVMVDRFRRNALETAYLELLSQLPEAVAPSPEVQQSQLETLQLLDRMLDG
LGHKARQAFLLSQLDNLTYADIAVQLAVSVSSVKKYMAKATEHCLLFRLEQGL
NT seq 522 nt   +upstreamnt  +downstreamnt
atgttacctgctgctgaatcgcccgctgcgccttctctcgcgctgttctacgccaccaat
caccgctggctcaagcactggctgacgggcaagttgcgttcggcttttgatgcggatgat
gtcgctcaggatacgtttctacgggtgatgtccgggcatcatctgtctgatattcgtgat
gccaaatcgtttctctgtacgctcgccaaacgcgtgatggtggatcgtttccgccgtaac
gcgctggaaaccgcgtatctggaattactcagccaactccctgaagcggtcgccccctca
ccggaagtacaacaaagccaactggaaaccctgcaattactggatcgaatgctggatgga
ctgggtcacaaggcacgtcaggcatttctgctgtcccagttggataaccttacctatgcc
gatattgccgtgcagcttgccgtatccgtcagttcggtgaagaaatatatggcgaaagcc
accgagcattgcctgctgtttcgtctcgagcaggggttgtga

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