Pengzhenrongella phosphoraccumulans: VTA80_00750
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Entry
VTA80_00750 CDS
T10828
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pphp Pengzhenrongella phosphoraccumulans
Pathway
pphp03030
DNA replication
pphp03410
Base excision repair
pphp03420
Nucleotide excision repair
pphp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pphp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VTA80_00750 (polA)
03410 Base excision repair
VTA80_00750 (polA)
03420 Nucleotide excision repair
VTA80_00750 (polA)
03440 Homologous recombination
VTA80_00750 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pphp03032
]
VTA80_00750 (polA)
03400 DNA repair and recombination proteins [BR:
pphp03400
]
VTA80_00750 (polA)
Enzymes [BR:
pphp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VTA80_00750 (polA)
DNA replication proteins [BR:
pphp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
VTA80_00750 (polA)
DNA repair and recombination proteins [BR:
pphp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
VTA80_00750 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VTA80_00750 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
DUF6257
Motif
Other DBs
NCBI-ProteinID:
WVT80490
LinkDB
All DBs
Position
complement(152263..155001)
Genome browser
AA seq
912 aa
AA seq
DB search
MADRLAPVSVNPPSAAPRAASSPPRLLIIDGHSMAYRAFFALPVDKFSTSTGQPTNAVYG
FTSMLANLLRDEAPTHVAVAFDAGRTTFRTEVYPEYKGTRDATPEPFKGQVPLIREILAT
LHISVLEKVNFEADDILATLAVQARGAGMEVLICTGDRDALQLVNDQVTVLYPVKGVSEL
TRMTPAVVQAKYGVPPERYPDIAALVGETSDNLPGIPGVGPKTAAKWIHAYGGLEGIVAS
ADQVPGKAGESLRANLDQVLLNRQLNRLLVDLELPLGPEDLAVRPWDREAMQTVFDALQF
RVLRERLFAMVPSEGDDTGPGEAAELSVAALDEGALEAWLAERVGTRLGLDVRGSGASSG
GDAWGIAIADGAGEAVAFDLTAVMPVDEAALAAWLADPTATKAVHASKEAWHALTGRGFT
LAGVTFDTELAAYLCQPDRRGYELADLAIGYLHRELRSDDSSGGGQGALDLEMDGSDEGR
RAGVRAAAVVELAEVLTGELADRGGLELLESLELPLVDVLARMEHAGIAADVGYLSELEK
HFDAIVVGAAADAYLVIDREVNLGSPKQLQEVLFDQLGMPKTKKIKTGFTTDAAALTDLF
EKTGHPFLQHLLDHRDAIRLRQTVEGLLRSVADDSRIHTSFQQTIAATGRLSSTDPNLQN
IPIRTEAGRRIRRAFVVGAGYETLLTADYSQIEMRIMAHLSGDEALIEAFNTGEDLHNYV
ASRVFSVGVDEVTPAMRSKIKAMSYGLAYGLSSFGLSKQLSIEVGEAAKLMEDYFSRFGG
VRDYLTGVVDEARATGYTATILGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADLIK
VAMLGVDRELTSRGLGTRLLLQVHDELLLEVAPGEREEVEALVRAEMGAAAVLTVPLDVS
VGVGESWHTAGH
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggcagataggttggcacccgtgagcgtcaatccaccatccgccgcgcctcgcgcggcc
tcgtctccgccccgtctgctgatcatcgacgggcactccatggcttatcgggcgttcttc
gcccttccggtcgacaagttctcgacctcgacggggcagccgacgaacgccgtctacggt
ttcacctcgatgctcgcgaacctgctccgcgacgaggcgccgacccacgtcgcggtcgcg
ttcgacgccggccgcacgacgttccgcaccgaggtgtaccccgagtacaagggcacgcgc
gatgcgacgcccgagcccttcaaggggcaggtgcccctgatccgcgagatcctcgcgacg
ctgcacatctcggtcctcgagaaggtcaacttcgaggccgacgacatcctcgccacgctc
gcggtccaggcgcgcggggccgggatggaggtcctcatctgcacgggtgaccgcgatgcg
ctgcagctcgtcaacgaccaggtcacggtgctctacccggtcaagggggtctcggagctc
acccgcatgacgcccgccgtcgtccaggcgaagtacggcgtgccgccggagcgctacccg
gacatcgcggcgctcgtcggcgagacgagcgacaacctcccgggcatcccgggcgtcggg
cccaagacggccgcgaagtggatccacgcctacggcgggctcgaggggatcgtcgcgagc
gccgaccaggttcccggcaaggccggggagtcgctgcgggcgaacctcgaccaggtgctg
ctcaaccgccagctcaaccggctgctcgtcgacctcgagctcccgctcgggccggaggac
ctcgccgtgcgcccgtgggaccgcgaggcgatgcagaccgtcttcgacgcgctccagttc
cgcgtgctgcgcgagcggctgttcgcgatggtcccgtcggaaggggacgacaccggtccg
ggcgaggccgccgagctgtcggtcgccgcgctcgacgagggagccctcgaggcctggctg
gcggagcgcgtgggcacgcggctcgggctcgacgtgcgcggctcgggggcgtcctcgggc
ggggacgcctggggcatcgccatcgccgacggcgcgggcgaggcggtggccttcgacctg
acggccgtgatgccggtcgacgaggccgcgctcgcggcctggctcgccgacccgaccgcg
accaaggcggtgcacgcctcgaaggaggcctggcacgcgctcacgggtcgtggcttcacc
ctggcgggggtcaccttcgacaccgagctcgccgcgtacctgtgccagccggaccgccgc
gggtacgagctggccgacctcgcgatcgggtacctgcaccgcgagctgcgcagcgacgac
tcgtcggggggcgggcagggcgcgctcgacctcgagatggacggttccgacgagggacgg
cgcgcgggggtgcgcgccgccgccgtcgtcgagctggccgaggtcctcaccggcgagctc
gccgaccgtggtggcctcgagctcctcgagtcgctcgagctgccgctcgtcgacgtgctc
gcgcggatggagcacgccgggatcgcggccgacgtcggctacctgtccgagctcgagaag
cacttcgacgcgatcgtcgtcggcgcggcggcggacgcctacctggtgatcgatcgcgag
gtgaacctcgggtcgcccaagcagctccaggaggtcctgttcgaccagctcgggatgccg
aagaccaagaagatcaagacgggcttcacgaccgacgccgcggcgctgacggacctgttc
gagaagacggggcacccgttcctgcagcacctgctcgaccaccgcgacgcgatccggttg
cggcagacggtggaggggttgctgcggtccgtcgcggacgacagccggatccacaccagc
tttcagcagacgatcgcggccacgggtcggttgtcctcgaccgacccgaacctgcagaac
atcccgatccgcacggaggcgggtcggcgcatccggcgcgcgttcgtcgtcggcgccggc
tacgagacgctgctgaccgccgactacagccaaatcgagatgcggatcatggcgcacctg
tccggcgacgaggccctcatcgaggcgttcaacaccggtgaggacctgcacaactacgtc
gcgtcgcgggtgttctcggtgggcgtggacgaggtgacgccggcgatgcgctcgaagatc
aaggcgatgtcctacgggttggcctacggcctgtcctcgttcgggctgtccaagcagctc
agcatcgaggtgggcgaggcggcgaagctcatggaggactacttctcccggttcggcggt
gtgcgggactacctcacgggcgtcgtcgacgaggcgcgggccaccggctacacggccacg
atcctcggccggcgccgctacctgcccgacctcacgagcgacaaccggcagcgccgcgag
atggcggagcggatggcgctgaacgcgcccatccagggcagcgccgccgacctcatcaag
gtggcgatgctcggggtggaccgcgagctcacctcccgggggctcggcacccggctcttg
ctccaggtccacgacgagctgctgctcgaggtcgcgccgggcgagcgcgaggaggtcgag
gcgctcgtgcgcgccgagatgggggcggcggccgtgctgacggtcccgctggacgtctcg
gtcggcgtcggcgagagctggcacaccgctgggcactga
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