Pengzhenrongella phosphoraccumulans: VTA80_04570
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Entry
VTA80_04570 CDS
T10828
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pphp Pengzhenrongella phosphoraccumulans
Pathway
pphp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pphp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VTA80_04570 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pphp03021
]
VTA80_04570 (rho)
03019 Messenger RNA biogenesis [BR:
pphp03019
]
VTA80_04570 (rho)
Transcription machinery [BR:
pphp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
VTA80_04570 (rho)
Messenger RNA biogenesis [BR:
pphp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
VTA80_04570 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
FANC_SAP
TFIIA
Motif
Other DBs
NCBI-ProteinID:
WVT82503
LinkDB
All DBs
Position
complement(971498..973597)
Genome browser
AA seq
699 aa
AA seq
DB search
MNGASKSAAGGAARSAAISALRLPELQALASQLGVTGTSKMRKSDLVDAIKANRDGGRSR
TSEPRRTTEVATTTGGTAVAAPVVTAPVVTAPVVTVPVDGAPAAVATSERAPRTRRPVRA
EQAEATEHGASDERSMPILDVRRAVAESRQNDARHTETRDDRAARAIDAVGSVATSIDRP
ERGSRRSGRGVGAPQGEQTEQVSSESGDDRAQRQQNQQSNQQGAQQTQGVQHAQGNGQGA
QQTQGNQPRQNPNRPAHQNAGPDEDDERGGRRRRSRDRYRDRDRSKRTRGGRPGGAESLV
GYEEVEVSEDDVLLPVAGILDIKDNYAFVRTSGYLPGDNDVYVAMGQVKKAGLRKGDAVT
GAVRQPREGEVPNPSAGRNSKFNALVRLDSVNGRSPEEAHGRAEFGKLTPLYPQERLRLE
TEPNILTTRVIDLVSPIGKGQRGLIVSPPKAGKTLVLQAIANAITTNNPEVHLMVVLVDE
RPEEVTDMQRTVKGEVIASTFDRPADDHTTVAELAIERAKRLVELGQDVVVLLDSITRLG
RAYNIAAPASGRILSGGVDSSALYPPKRFFGAARNIEHGGSLTILATALVETGSKADEVI
FEEFKGTGNMELKLSRQLADKRIFPAVDVDASGTRREEILVPADELKINWKLRRVMSALD
QQQAIELLLGKLRETRSNVEFLLQVQKTTGPLNAQDRDR
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
gtgaatggtgcctcgaagagcgccgcaggtggcgccgcccggagcgccgcgatctccgcg
ctgcgcctcccggagcttcaggcgctcgcgtcccagctcggggtgaccggtacgtccaag
atgcgcaagagcgatctcgtggacgccatcaaggcaaaccgggacggtggccgctcacgg
acgagcgagccgcgccggacgaccgaggtcgccacgacgacgggcgggactgctgttgcg
gcccctgtcgtcaccgctcccgtggtgactgctcctgtggtgacagttcccgtggacggc
gccccggcggctgtcgcgacgagcgagcgggccccgcgcacgcggcgccccgtgcgcgcg
gagcaggcggaggcgaccgagcacggcgcgtccgacgagcgttccatgccgatcctcgac
gtacgccgcgcggttgccgagtcgcgtcagaacgacgcacggcacaccgagacccgggac
gaccgcgcggctcgcgcgatcgacgccgtcggctccgtcgcgacgtcgatcgaccgtccc
gagcgcgggtcgcggcggtccggccgcggagtcggcgcgccgcagggcgagcagaccgag
caggtgtcgtcggagtccggcgacgaccgcgcgcagcgtcagcagaaccagcagtcgaac
cagcagggcgcacagcagacgcagggcgtccagcacgcacagggcaacgggcagggcgcg
cagcagacgcagggcaaccagccgcgtcagaacccgaaccgtccggcgcaccagaacgct
ggtccggacgaggacgacgagcgcggcggccgtcgccgtcgcagccgcgaccggtaccgc
gaccgtgaccgcagcaagcgcacgcgcggcggccgtccgggcggcgccgagagccttgtc
ggctacgaagaggtcgaggtcagcgaggacgacgtcctgctcccggtcgccgggatcctc
gacatcaaggacaactacgcgttcgtccgcacaagcggctacctgccgggcgacaacgac
gtgtacgtggcgatgggtcaggtcaagaaggcgggcctgcgcaagggtgacgccgtgacc
ggcgccgtccgccagccgcgcgagggtgaggtccccaaccccagcgccggccgcaacagc
aagttcaacgcgctcgtgcggctcgactcggtcaacggccgcagccccgaggaggcgcac
ggtcgcgccgagttcggcaagctcacgccgctgtacccgcaggagcgcctgcggctcgag
accgagccgaacatcctcacgacccgggtcatcgacctcgtctcgccgatcggcaagggg
cagcgcggtctgatcgtgtccccgcccaaggcgggcaagaccctcgtgctccaggcgatc
gccaacgcgatcacgacgaacaaccctgaggtccacctcatggtcgtgctcgtcgacgag
cgtcctgaagaggtcaccgacatgcagcgcacggtgaagggcgaggtcatcgcctcgacc
ttcgaccggccggcggacgaccacaccacggtcgccgagctcgcgatcgagcgggccaag
cgcctcgtcgagctgggccaggacgtcgtcgtgctgctcgactcgatcacccggctcgga
cgtgcgtacaacatcgcggccccggcatcgggccgaatcctgtccggtggtgtcgactcg
agcgcgctctacccgccgaagcggttcttcggcgcggcgcgcaacatcgagcacggcggg
tcgctgaccatcctggcgacggccctggtcgagaccggctcgaaggccgacgaggtcatc
ttcgaagagttcaagggcaccgggaacatggagctcaagctctcccggcagctcgcggac
aagcggatcttcccggcggtggacgtcgacgcgtccggcacgcgccgcgaggagatcctg
gtcccggcggacgagctcaagatcaactggaagctgcggcgcgtgatgagcgcgctggat
cagcagcaggcgatcgagctgctgctcggcaagctgcgcgagacgcggtcgaatgtcgag
ttcctgctgcaggtccagaagacgaccggtccgctcaacgcgcaggaccgcgaccgctag
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