Pengzhenrongella phosphoraccumulans: VTA80_06570
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Entry
VTA80_06570 CDS
T10828
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pphp Pengzhenrongella phosphoraccumulans
Pathway
pphp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pphp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VTA80_06570 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphp03019
]
VTA80_06570 (groL)
03110 Chaperones and folding catalysts [BR:
pphp03110
]
VTA80_06570 (groL)
03029 Mitochondrial biogenesis [BR:
pphp03029
]
VTA80_06570 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pphp04147
]
VTA80_06570 (groL)
Enzymes [BR:
pphp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
VTA80_06570 (groL)
Messenger RNA biogenesis [BR:
pphp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
VTA80_06570 (groL)
Chaperones and folding catalysts [BR:
pphp03110
]
Heat shock proteins
HSP60 / Chaperonin
VTA80_06570 (groL)
Mitochondrial biogenesis [BR:
pphp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
VTA80_06570 (groL)
Exosome [BR:
pphp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VTA80_06570 (groL)
Exosomal proteins of other body fluids (saliva and urine)
VTA80_06570 (groL)
Exosomal proteins of breast cancer cells
VTA80_06570 (groL)
Exosomal proteins of colorectal cancer cells
VTA80_06570 (groL)
Exosomal proteins of bladder cancer cells
VTA80_06570 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WVT81568
LinkDB
All DBs
Position
complement(1414886..1416526)
Genome browser
AA seq
546 aa
AA seq
DB search
MAKIIAFDEEARRGMERGMNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPLEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPIALKRGIE
KAVEAVTSELLKAAKEIETKEEIAATAGISAGDSSIGDLIAEAMDKVGKEGVITVEESNA
LGLELELTEGMRFDKGFLAGYFVTDPERQEAVLEDAYVLLVESKISSVKDLLPLLEKVIQ
SGKPLVIIAEDVDGEALATLVVNKIRGTFRSVAVKAPGFGDRRKAMLQDMAILTGAQVVS
ETVGLKLDTVGLEVLGTVRKAVITKDETTLVEGGGEPDQIAGRVSQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA
GKLAFERAEIIALEGDEATGARIVALAIDAPLKQIAINAGLEGGVVAERVRNLPNGHGLN
AATGVYEDLLAAGVNDPVKVTRSALQNAASIAALFLTTEAVVAEKPERNGGAAQGGGDGG
MGGMDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcattgcgttcgacgaggaggcacgtcgcggcatggagcggggcatgaat
gccctcgccgacgccgtcaaggtcacgctcggcccgaaaggccgcaacgtcgtcctcgag
aagaagtggggcgcgcccaccatcaccaacgatggtgtgagcatcgccaaggagatcgag
ctggaggaccccctcgagaagatcggggccgagctcgtcaaggaggtcgccaagaagact
gacgacgtcgccggtgatggaaccaccaccgccaccgtgctcgcccaggcgctcgtgcgc
gagggcctgcgcaacgtcgccgccggcgccaacccgatcgcgctcaagcgcggcatcgag
aaggccgtcgaggccgtcacctctgagctgctcaaggcagccaaggagatcgagaccaag
gaagagatcgcggccaccgccgggatctcggccggggactcctccattggtgacctcatc
gctgaggcgatggacaaggtcggcaaggaaggcgtcatcacggtcgaggagtccaacgct
ctcggcctcgagctcgagctgaccgaggggatgcgcttcgacaagggcttcctcgccggt
tacttcgtcaccgacccggagcgtcaggaagccgtcctcgaggacgcgtacgtcctgctc
gtcgagtcgaagatcagttccgtcaaggacctgctgcccctgctggagaaggtcatccag
tccggcaagccgctggtcatcatcgccgaggacgtcgacggtgaggccctggccacgctc
gtcgtgaacaagatccgcgggacgttccgctcggtcgccgtcaaggcgcccggcttcggc
gaccgtcgcaaggcgatgctgcaggacatggccatcctcacgggtgcccaggtcgtctcc
gagaccgtcgggctcaagctcgacaccgtcggcctcgaggtgctcggcaccgtccgcaag
gctgtcatcaccaaggacgagacgactctcgtcgagggtggcggcgagcccgaccagatc
gccggtcgcgtcagccagatccgtgccgagatcgagaactcggactcggactacgaccgc
gagaagctccaggagcgcctcgccaagctggccggtggcgttgccgtcatcaaggccggt
gcggccaccgaggttgagctcaaggagcgcaagcaccgcatcgaggacgccgttcgcaac
gcgaaggccgccgtcgaagagggcatcgtcgccggtggtggcgtcgctctcatccaggcg
ggcaagctcgcgttcgagcgtgccgagatcatcgccctcgagggcgacgaggccaccggt
gctcgcatcgtggcactcgcgatcgacgctccgctcaagcagatcgcgatcaacgccggc
cttgagggtggcgttgtggccgagcgcgtgcgcaacctgccgaacggtcacggcctgaac
gccgcgaccggcgtgtacgaggacctgctcgcggccggggtcaacgacccggtcaaggtc
acgcgttccgcgctccagaacgcggcgtccatcgctgcgctcttcctcaccaccgaggcg
gtcgtggctgagaagcccgagcgcaacggcggcgcggcccagggcggcggcgacggcggc
atgggtggcatggacttctga
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