Pengzhenrongella phosphoraccumulans: VTA80_06590
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Entry
VTA80_06590 CDS
T10828
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pphp Pengzhenrongella phosphoraccumulans
Pathway
pphp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pphp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VTA80_06590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphp03400
]
VTA80_06590
Enzymes [BR:
pphp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
VTA80_06590
DNA repair and recombination proteins [BR:
pphp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VTA80_06590
Prokaryotic type
VTA80_06590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
CysG_dimeriser
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
WVT82519
LinkDB
All DBs
Position
1419426..1420103
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AA seq
225 aa
AA seq
DB search
MRAPAWTDHVAPDWAAALAPVAPQLAALAGWLEAESAAGRGYLPPSDSVLRAFTRPLAEV
RVLVVGQDPYPTPGHSMGLAFSTAPHVRPLPRSLANIFAELTADVGATTPKSGDLTAWAD
RGVMLLNRVLTVRPGESAAHRRRGWEQVTDAAIAALVARGGPLVAVLWGKDAQSVAGALG
ATPVVASAHPSPLSAHRGFIGSRPFSRVNALLVAQGAEPIDWYLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
ctgcgtgcccccgcgtggacggaccacgtggcgccggactgggccgcggcgctcgccccg
gtcgccccgcagctcgcggcgctggcgggctggctcgaggccgagtccgccgcgggccgg
ggctatctgccgccgtcggacagcgtgctgcgcgccttcacgcggccgctcgccgaggtg
cgggtcctcgtcgtcgggcaggatccgtacccgacacccgggcactcgatgggactcgcg
ttctcgacggcgccccatgtgcgtccgctgccgcgctcgctcgcgaacatctttgccgag
ctcaccgccgacgtcggcgccacgaccccgaagtccggcgacctgaccgcgtgggcggac
cgcggcgtcatgctgctcaaccgcgtgctgacggtgcggcccggcgagagcgcggcccat
cgacgccgggggtgggaacaggtcacggacgccgcgatcgccgccctggtggcccgtggc
gggcctctcgtggccgtcctgtggggcaaggacgcccagtcggtcgcgggtgcgctcggg
gcgaccccggtggtcgcctcggcccacccgagccccctgtcggcgcatcgcggcttcatc
gggtcgcgaccgttctcgcgggtcaatgcgctgctcgtcgcgcagggtgcggagcccatc
gactggtacctgccctga
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