Entry |
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Name |
(GenBank) SMC family ATPase
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KO |
K03546 | DNA repair protein SbcC/Rad50 |
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Organism |
pphp Pengzhenrongella phosphoraccumulans
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Brite |
DNA repair and recombination proteins [BR:pphp03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VTA80_08400
Archaeal homologous recombinant proteins
VTA80_08400
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SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
complement(1815444..1818578)
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AA seq |
1044 aa
MHLRSLTLQALGPFTGTYTIDFEQLGASGLYLLEGPTGSGKSTIIDAIVFALYGKVASAD
SSDDRLRSGYADPDTETFVDLVFETGSGEYRVLRSPEWQRAKKRGAGTTKQQASVKLWRL
AGPDGALEPGTVDPAGGELISTRLDEAGAEIQRAIGLDRAQFVQTIVLPQGEFASFLRAD
PEHRRSLLQKVFGTAVYERVQDQLAVMRQDAQRAVGAARTDVGAAVAHFLGAAEIADGAQ
ITHDAQITHGAQITDVAEITDDAVGGAAGHGSLASASELRAFADTASAEVLPAVRAHVDA
LAAAAAEAAASAAIARDGLAGARSGFDTARALADAIAQRDALRAERDRLAQDAPARAADV
ERRDLARRAAVVTSVLTAAEVAAAAAEQARDRLTRARAQVPAELALLDRVGLTAARDDYA
AQAATLARLADLERDLPDRRRHLAADQATLARALAEQESLAADAATRPAVRAEILRATAA
AREVAADLPARRQQEAAARAAAEAARSAETLAVTLSAAIAAAAEALATAREAIAGEAYLR
SRRLAGIAGELAAGLAADAPCPVCGALEHPHPAGIAVDHATAEQVEAAEAVRAAAEQAST
RASGIVATLTERLAGQRALAGPKTAAEHDADAADLAVLVAMAVSARTELDVLRAALADHD
AATEEALLRARALDTAIATARAAIAALTSDLAADIHEIDAARGSAPTVAAVVAELREKVV
ACGALATALEAADRAEQDLTTRSRELADALAANGFADAATARAALLPPADLVRLEATVDV
HAAAVARVADGLAAPAIARLTDDVVVDLDAAQAELDGAEAAAGAASGAAALATRAATSAA
GAMGAVEAALEFLQTARDLARPVVRMADLAAASGGDNTKRLTLATYVLVKRFEDVVAAAN
DRLLSMSDGRFELVRSDEREDVRSRRTGLSMKVIDHRMEAARDPRTLSGGETFYVSLCLA
LGMADVVTAEAGGIELGTLFVDEGFGSLDPETLEAVLVELGKLRAGGRVVGVVSHVEALK
QSIAERIEVRRLPDGSSTLTVRAG |
NT seq |
3135 nt +upstreamnt +downstreamnt
atgcacctgcgctcgctcacgctgcaggcgctcgggccgttcaccgggacctacacgatc
gacttcgagcagctcggcgcatccgggctgtacctgctcgagggcccgaccggctcgggc
aagtccacgatcatcgacgcgatcgtgttcgccctgtacggcaaggtcgcctcggcggac
tcgagcgacgaccggctgcggtcgggctacgccgaccctgacaccgagacgttcgtcgac
ctggtgttcgagaccggctcgggcgagtaccgcgtgctgcgcagccccgagtggcagcgc
gccaagaagcgcggcgcgggcaccaccaagcagcaggcgtcggtcaagctgtggcgcctc
gccggacccgacggcgcgttggagccggggacggtggaccccgcaggcggcgagctgatc
tcgacgcggctggacgaggcgggcgcggagatccagcgggcgatcgggctcgaccgtgcc
cagttcgtgcagacgatcgtgctgccgcagggggagttcgccagcttcctgcgcgcggac
cccgagcaccgccgcagcctgctgcagaaggttttcggtaccgccgtgtacgagcgggtc
caggaccagctcgccgtgatgcgtcaggacgcccagcgcgccgtcggcgcggcccgcacg
gacgtcggcgcagccgtggcccacttcctcggggccgcggagatcgctgatggcgctcag
atcactcatgacgcgcagatcacccatggcgcgcagatcaccgacgtcgcggagatcacc
gacgacgccgtcgggggcgcggccgggcacgggtcgctggcctcggcgagcgagttgcgc
gcgttcgcggacacggcctccgccgaggtgctgccggcggtgcgggcgcacgtcgacgca
cttgcggccgccgcggcggaggcggccgcctccgccgcgatcgcccgggacgggctggcc
ggggcacggtcgggtttcgacacggctcgggcgctggcagacgccatcgcgcagcgcgac
gccctgcgcgccgagcgcgaccggctcgcccaggacgcgcccgcccgggccgccgacgtc
gagcgccgcgacctggcccggcgcgcggcggtcgtcacctccgtcctcaccgccgccgag
gtcgccgccgcggccgcggagcaggcccgggatcggctcacccgcgcccgggcacaggtg
cccgccgagctcgccctgctcgatcgcgtcggcctgaccgcggcccgcgacgactacgcc
gcccaggccgcgacccttgctcggctcgccgacctcgagcgcgacctgcccgaccgccgt
cgccatctggcggccgaccaggcgaccctcgcgcgcgccctggccgagcaggagagcctg
gcggcggacgccgcgacccggccggccgtgcgcgccgagatcctcagggcgaccgccgcc
gcccgggaggttgccgcggacctgcccgcccgccgccagcaggaagccgccgcccgcgcc
gcagcggaggccgcgcggtcggccgagactctcgcggtgacgctctccgccgccatcgcg
gccgccgctgaggcgctcgcgacggcccgcgaggcgattgcgggcgaggcgtacctgcgc
agtcgccggctcgcggggatcgccggtgagctggccgccggcctcgccgcggatgcgccg
tgcccggtgtgcggcgcgctcgagcacccgcaccccgcggggatcgccgtcgaccatgcc
acggccgagcaggtcgaggccgccgaggcggtccgcgctgccgcggagcaggcgtccacc
cgagcgtccggcatcgtggcgacgctgaccgagcggctcgccggacagcgcgcgctcgcc
ggcccgaagaccgcggccgagcacgacgccgacgcggccgacctggccgtgctcgtcgcg
atggccgtctccgcccgcaccgagctcgacgtgctccgggcggcgctcgccgaccacgac
gccgccaccgaggaggcgctcctgcgcgctcgcgcgctcgacacggcgatcgcgaccgcg
cgggccgcgatcgcggcgctgacgtccgacctcgccgccgacatccacgagatcgacgcc
gcacgtggttccgcgccgaccgtcgctgctgtggtcgcggagctgcgcgagaaggtcgtg
gcgtgcggcgcgctcgcgacggcgctcgaggctgccgaccgggccgagcaggacctcacc
acccggtcgagggagctcgccgacgctctcgcggccaacgggttcgccgatgccgcgaca
gcccgggccgccctgctgccccccgccgacctcgtccggctggaggcgacggtcgacgtg
cacgccgccgcggtcgcccgggtcgcagacggcctggccgcccccgcgatcgcccggctg
acggacgacgtcgtcgtcgatctggacgcggcgcaggcggagctggacggtgcggaggcg
gccgcaggtgccgccagcggtgcggccgcgctcgcgacccgggccgcgacgtcggccgcg
ggggcgatgggtgcggtcgaggcggcgctcgagttcctgcagacggcgcgcgacctggcc
cggccggtggtgcggatggccgacctggccgcggcgtcgggcggcgacaacaccaaacgg
ctgaccctcgccacgtacgtgctggtcaagcgcttcgaggacgtggtcgcggcggcgaac
gaccggctgctgtcgatgtcggacgggcggttcgagctcgtgcgcagcgacgagcgcgag
gacgtgcgcagccggcgaaccggactgtcgatgaaggtcatcgaccaccggatggaggcc
gcgcgcgatccgcgcacgctgtcgggcggcgagaccttctacgtctcgctctgcctggcg
ctggggatggccgacgtcgtgaccgccgaggcgggcgggatcgagctcgggacgctgttc
gtcgacgagggcttcggctcgctcgacccggagacgctcgaggccgtgctggtcgagctc
ggcaagctgcgggcgggcgggcgagtggtgggggtcgtctcccacgtcgaggcgctcaag
cagtcgatcgcggaacggatcgaggtccgccggctgcccgacggctcgagcaccctgacg
gttcgggccggctga |