Pengzhenrongella phosphoraccumulans: VTA80_09185
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Entry
VTA80_09185 CDS
T10828
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pphp Pengzhenrongella phosphoraccumulans
Brite
KEGG Orthology (KO) [BR:
pphp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pphp03032
]
VTA80_09185 (gyrB)
03400 DNA repair and recombination proteins [BR:
pphp03400
]
VTA80_09185 (gyrB)
Enzymes [BR:
pphp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VTA80_09185 (gyrB)
DNA replication proteins [BR:
pphp03032
]
Prokaryotic type
DNA Topoisomerases
VTA80_09185 (gyrB)
DNA repair and recombination proteins [BR:
pphp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VTA80_09185 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
WVT82048
LinkDB
All DBs
Position
complement(1986019..1988052)
Genome browser
AA seq
677 aa
AA seq
DB search
MADQSPTNGASATTDGSYNASAITVLEGLEAVRKRPGMYIGSTGERGLHHLVYEVVDNSV
DEALAGYCDHIEVTLLADGGVRVVDNGRGIPVGIVASEGKSAVEVVLTVLHAGGKFGGTG
YAVSGGLHGVGVSVVNALSSTLEVEVRRQGSVWRQAFADGVPQASLAQGEDSDDTGTTVT
FWASDVIFETTTYDFETLRTRFQQMAFLNKGLQISLTDERPSHTGTDDEVVGATEADAAE
PVAYRTVTYKYDGGLVDYVRHLNSAKKVELIHPEIIDFESEDTERRLSLEIALQWTGAYT
ESVHTYANTIATTEGGTHEEGFRAAMTSLINRYAREKGIIKDKDDNLTGDDIREGLTAVI
SIKLGEPQFEGQTKTKLGNTEAKTFVQRVVNDQLGDWLGSHPNEARDVIRKSIQASQARM
AARKAREATRRKGLLESGGMPGKLRDCQSNKPEECEVFIVEGDSAGGSAVRGRNPRTQAI
LPIRGKILNVERARLDRALGNQEVQALITAFGTGIGEDFDLAKLRYHKIVLMADADVDGQ
HICTLLLTLLFRYMRPLIEHGHVFLAQPPLYRIKWTNAEDDYVYSDREKEAFLVAGQAAG
KRIPKDAGIQRYKGLGEMDYSELWSTTMDPEQRTLLQVTMDDAAAADEIFAILMGEDVES
RRSFIQRNAKDVRFLDI
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaccagagccccaccaacggtgccagcgcgacgacggatggtagctacaacgcc
agtgccatcaccgtgctcgaaggtctcgaggccgttcgcaagcgtcccggaatgtacatc
ggttcgaccggcgagcggggcctgcaccacctggtgtacgaggtcgtcgacaactccgtc
gacgaggcgctggccggctactgcgaccacatcgaggtgaccctgctcgccgacggtggc
gtgcgggtcgtcgacaacggccgcgggatccccgtcggcatcgtcgcgagcgagggcaag
tcggccgtcgaggtcgtgctcaccgtgctgcacgcgggcgggaagttcggcgggaccggc
tacgcggtgtcgggtgggctgcacggcgtcggcgtctcggtcgtcaacgcgctcagctcc
accctcgaggtcgaggtgcgccggcagggttcggtctggcgccaagccttcgccgacggc
gtcccgcaggcgtcgctcgcgcagggtgaggactcggacgacaccggcacgaccgtgacg
ttctgggccagcgacgtgatcttcgagaccacgacctatgacttcgagacgctccgcacg
cgcttccagcagatggccttcctcaacaagggcctgcagatctccctcacggacgagcgt
ccgagccacacgggcaccgatgatgaggtcgtcggggcgaccgaggccgacgccgccgag
ccggtggcctaccgcacggtgacctacaagtacgacggcggcctcgtcgactacgtgcgg
cacctcaactcggcgaagaaggtcgagctgatccacccggagatcatcgacttcgagtcg
gaggacaccgagcgccggctgtcgctcgagatcgcgctgcagtggacgggtgcgtacacc
gagtcggtgcacacgtacgcgaacacgatcgccacgaccgagggcggcacgcacgaagag
ggcttccgtgccgcgatgacctccctgatcaaccgctacgcgcgcgagaagggcatcatc
aaggacaaggacgacaacctcaccggggacgacatccgggagggcctgaccgccgtcatc
tcgatcaagctcggcgagccgcagttcgagggccagaccaagacgaagctcggcaacacc
gaggccaagacgttcgtccagcgggtcgtcaacgaccagctcggcgactggctcggcagc
cacccgaacgaggcgcgcgacgtcatccgcaagtcgatccaggcctcgcaggctcggatg
gcagcccgcaaggcgcgcgaggcgacccgacgcaagggcctgctcgagtccggcggcatg
cccggcaagctgcgggactgccagtcgaacaagcccgaagagtgcgaggtcttcatcgtc
gagggtgactcagccggtggttccgcggtccgcgggcgcaacccgcgcacgcaggcgatc
ctccccatccgcgggaagatcctcaacgtcgagcgcgcccggctcgaccgcgcgctgggc
aaccaggaggtccaggcgctgatcacggcgttcggtaccggcatcggcgaggacttcgac
ctggccaagctgcgctaccacaagatcgtgctgatggccgatgcggacgtcgacggccag
cacatctgcacgctgctgctcacgctgctcttccggtacatgcgcccgctgatcgagcac
ggtcacgtgttcctcgcgcagcccccgctgtaccggatcaagtggaccaacgccgaggac
gactacgtctactcggaccgcgagaaggaagccttcctcgtcgcgggccaggcagccggc
aagcgcatccccaaggacgccggcatccagcggtacaagggcctcggtgagatggactac
tccgagctgtggtccacgaccatggaccccgagcagcgcacgctgctccaggtcaccatg
gacgacgccgcggccgccgacgagatcttcgcgatcctcatgggcgaggacgtcgagtcc
cgccggtcgttcatccagcgcaacgccaaggatgtgcggttcctcgacatctga
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