Pengzhenrongella phosphoraccumulans: VTA80_10115
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Entry
VTA80_10115 CDS
T10828
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
pphp Pengzhenrongella phosphoraccumulans
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GFIT
Motif
Pfam:
CLIPPER
Sigma70_r2
zf-HC2
Sigma70_r4_2
NPCBM_assoc
Motif
Other DBs
NCBI-ProteinID:
WVT82219
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Position
2197013..2200255
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AA seq
1080 aa
AA seq
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MGADRPAEGGESRRSAEIWSELSSDAELITAARGGDSAAFGTLYERHAPAARAVARQYTR
SSADAEDIVSDGFIRVFAVVRAGGGPDVAFRAYLFTVVRRLAYAGAQGGRRVQPTDDMAV
FETAFGAAGSPEDPALAGFERGVVAKAYASLPERWQAALWYTEIEQLSAAQIAPLLGLTA
NGVAALAYRAREGLRQAYLQQHLAAPQSDLCRTVNDKFGAYVRGGLAKRETAQVEAHLDS
CGECRSLVLELGDVNHGLRIVVAPLILGVIGLGALASPLPIGGLVGIGTGVLAGSGGAAA
GLGVGAGAGATVGSAATVGSAATAGSAATVGSAATAGSAAAGAAAGTAGTAAAGTAAAST
AAASTAAVGTAAAGTAAASTAAAGTAAAGAAAATAGTAATVGAAAGTAAAGAAAATAGTA
AVAGTFVGSVAGSAAMAAGAMAGTAAVAVGTAGAAAATGGIAAFVASIPMTVVGAVAAGL
VAGSLAIAGVNGIGDDGSGVSGEVLAGPTASPSASTTDALTDELLAAGGAETPPSDAVPP
GPADVPVDILAPADAPLVVVPAVVVTPAEPSATGTTLTPAPPVVPTPTPTPTPVPPALTP
VDLRVVGQVSAVVLTAGSDGAVSFTIDNAGQSAARDLRAELVLPAGITYAGSPASTAPWA
CGAAEGASTVVCTLPELAGLSTSTVTVTLRVAEGFAPVQADLALTVGSGAVQASTFLQVP
VQPSPARLALDQSPAGALVVGTASTVTVPLRNAGGMDVGAVRVDLRLPAGVHWEGTEPGV
WTCVEGAEPRDLVCTTAAVGPRTAVPLALWLRAGDSALGQAPTLAIVATRDGVTEALRGE
VPITVSPVPVELAVSAPARVVAPVGGHSRIELTVANVGAADAADVVVGVTAPAGLSLVSD
QCSAGPGDITCALGAVPVGRSGVLVLEAQADGSVVGDLVDGLTVTVTATDVAPLVSQVPI
TVVAPKLAFTPDSLATVVLDPDPADGPHDGTVTFAVANTGGADARNVVTTVLLPAGITFV
PDGEGGGHDGSGTLVRSLGDLAPGATVPVVLRVHVEDASSLAVQISVGATRVDPIVLATR
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgggagcggaccgtcccgccgagggtggagagagtcgacgctcggccgagatctggagt
gagctgtccagcgacgctgagttgatcacggctgcccggggtggggactcggccgcgttc
ggcacgctgtacgagcggcacgcgcccgccgcacgggccgtcgctcggcagtacacccga
tcgtccgcggacgccgaagacatcgtgtccgacggcttcatccgggtcttcgccgtcgtt
cgcgccggcggtggaccggacgtcgccttccgcgcgtacctgttcaccgtcgtgcggcgg
ttggcctacgccggcgcccagggtggtcggcgcgtccagccgaccgatgacatggccgta
ttcgagacggccttcggcgcggccggctcgcccgaggaccccgcgctcgccgggttcgag
cggggcgtcgtcgccaaggcgtacgcctccctgccggaacggtggcaggcagcgctctgg
tacaccgagatcgaacagctcagcgccgcacagatcgcacccctgctcgggttgaccgcg
aacggggtcgccgcgctcgcgtaccgcgcccgggagggtctgcgccaggcgtacctccag
cagcacctcgccgcgccgcagagcgacctgtgccgcacggtgaacgacaagttcggcgcg
tacgtgcgcggcggcctggccaagcgcgagaccgcgcaggtcgaggcgcacctcgactcg
tgcggcgagtgccgctcgctcgtgctcgagctcggcgacgtcaaccatggcctgcggatc
gtggtcgccccgctgatcctcggcgttatcgggctcggggcgctcgcgagcccgctgccg
atcggtggcctcgtcgggatcggtacgggcgtgctggccggttcgggtggcgcggcggcc
ggtctgggggtgggcgctggcgctggcgcgactgtgggttcggcggccactgtgggttcg
gctgcgactgcgggttcggcggccactgtgggttcggctgcgactgcgggcagcgccgcc
gcaggtgccgctgctggaacggccggcactgcggccgccggcaccgccgcggccagtacc
gcggcggccagtaccgcggcggtgggaactgcagcggccggcaccgcggcagccagtacc
gcggccgccggcaccgcagccgctggagccgcagcggcaaccgccgggaccgccgcgacg
gtcggtgcggcggccggaaccgccgccgcgggcgccgcagcagcgaccgcgggcacggct
gccgtggcaggaacgttcgtggggagtgtcgccggttcggccgcgatggcggccggggcc
atggcgggcaccgccgccgtcgcggtcgggacagcgggcgccgcggccgcgacgggcggg
atcgcggcgttcgtcgcgtcgatcccgatgaccgtggtgggcgcggtagctgccggtctg
gtcgcgggctcgttggcgatcgccggcgtcaacggcatcggggatgacggcagcggcgtg
tcgggcgaggtcctcgcgggcccgacggcgtctcccagcgccagcacgaccgacgccctg
accgacgagctcctcgccgcgggcggcgcggagacgccgccgagcgacgcggtcccaccc
ggcccggccgacgtgccggtcgacatcctcgctccggctgacgcaccactggtcgtggtg
cccgcagtggtcgtcacacccgcggagccgtcggcaaccgggacgaccctgaccccggca
ccgcccgtagtcccgaccccgacccccactccgacccccgtgccgccggcgctcaccccc
gtcgaccttcgcgtcgtcggccaggtcagcgccgtggtgctgacggccgggagcgacgga
gcggtgtcgttcacgatcgacaacgccgggcagtcggccgcgcgcgacctgcgggccgag
ctcgtgctccctgcgggcatcacctacgccgggtcgccggcatcgacggcgccctgggcc
tgcggggctgcagagggagcgagcaccgtcgtatgcacgctgcccgagctggccgggctc
tcgacgagcaccgtcacggtcacgctgcgcgtcgccgaggggttcgcgccggtccaggcc
gacctcgccctcaccgtcgggagcggcgcagtgcaggccagcacgttcctgcaggtccca
gttcagccctcgcccgcccgcctggcgctcgaccagagcccggccggtgccctcgtggtc
ggtaccgcctcgaccgtcacggttccgctccgcaacgcaggcggcatggacgtcggcgcg
gtccgggtcgacctccggctgcctgcgggcgtccactgggagggcaccgaacccggggtc
tggacctgcgtcgagggtgccgagccgcgcgatctcgtgtgcacgaccgcagcggtcggg
ccccggacggccgtgccgctcgccctctggctgcgtgcgggtgacagcgccctcggccag
gcgccgacgctcgccatcgtcgcaacccgcgacggggtcaccgaggcgttgcggggcgag
gttccgatcacggtctcgccggtgcccgtcgagctcgcggtgtcggcgcccgcacgggtc
gtcgccccggtcggtgggcactcgcggatcgagctcaccgtcgcgaacgtgggcgcggcc
gacgcggcggacgtcgtggtcggggtgaccgctccggctggtctgtcgctggtgagcgat
cagtgcagcgcaggtcctggagacatcacgtgcgcgctcggcgcggtcccggtcggtcgg
tcgggcgtcctcgtgctcgaggcacaggcggacggatcggtcgtcggcgatctggtcgac
ggcctgacggtgacggtgacggcgaccgacgtcgccccgctcgtctcccaggtcccgatc
acggtggtcgcaccgaagctcgcgttcaccccggacagcctggccaccgtcgtgctcgac
cccgacccggccgacgggccgcacgacggcacggtgaccttcgcggtcgcgaacaccggc
ggggccgacgcccgcaacgtcgtgaccaccgtcctgctcccggcgggcatcacgttcgtg
cccgacggcgagggtgggggccacgacgggtccggaaccctcgtgcgctccctgggagac
ctcgcgcctggcgccacggtgcccgtcgtgctgcgggtgcacgtcgaggacgcgtcgagt
ctcgcggtccagatcagcgtcggcgcgacccgggtcgacccgatcgtgctggccacccgt
tag
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