| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
pphp Pengzhenrongella phosphoraccumulans
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pphp00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VTA80_12295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pphp03021]
VTA80_12295
03400 DNA repair and recombination proteins [BR:pphp03400]
VTA80_12295
Enzymes [BR:pphp01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VTA80_12295
Transcription machinery [BR:pphp03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
VTA80_12295
DNA repair and recombination proteins [BR:pphp03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
VTA80_12295
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
2665501..2669376
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| AA seq |
1291 aa
MLDVNVFDELRIGLATAEDIRAWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHVELAAPVTHIWFFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDEAGRHEDLPNLQNEIDLEKKEITDRRDNDIEARAKKLEAD
LAELEAEGARADARRKVRDSAEREMTQLRKRSDLELERLDTVWDRFKNLKVADLEGDELL
YRQLSDRYGNYFEGSMGAAAIQKRLQAFDLEAEAESLRDTIKNGKGQRKTRALKRLKVVN
AFLTTSNTPEGMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
PVVWDVLEEVITEHPVMLNRAPTLHRLGIQAFEPQLVEGKAIHLHPLVCGAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPSDGRPVTMPSQDMIIGLYHLTSDKADALGAGR
AFSSVSEAMMAFDAHTIDLNAEILIRLEDFIPPVDGFDAPEGWTGAEPVIFGTTLGRALF
NELLPVDYPYENGVVDKKRLSTIVNDLAERYPKVEVAASLDALKAAGFSWATRSGVTISI
SDVITPVEKAAILEEHEGRAAKVQTQYEKGLITDDERRQELIEIWTQATDKVAEAMRTNF
PPSSTIFRMVGSGARGNWMQVRQIAGMRGLVANPKGEIIPRPIKSNYREGLSVLEYFIAT
HGARKGLADTALRTADSGYLTRRLVDVSQDVIVREDDCGTERGLTMTIGVPAGDGTLRRH
DKVETSVYTRTLATTVEVDGKVLGHSGDDVGDVLLDALLAAGVTELKIRSVLTCESRVGT
CAKCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQGLPRVQ
ELFEARTPKGEGPIAEFSGQVTIDESDRTRRIVLTPDDGSEELAYPITKRSRLLVADGDH
VEVGTQLVQGAVDPKKVLRILGPRATQKHLVDEVQEVYRSQGVDIHDKHIEVIVRQMLRR
VTVLDSGDSDLLPGELAERGRFEDANRRAVAEGGQPASGRPELMGITKASLATDSWLSAA
SFQETTRVLTEASMSGRSDPLLGLKENVIIGKLIPAGTGLPRYGNVSVEPTEEAKAELYP
SFGYDEIDFPALGLGSGEAIPLEDLDFGDFR |
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| NT seq |
3876 nt +upstreamnt +downstreamnt
ttgctcgacgtcaacgtcttcgatgagttgcgtatcggtctggccacggccgaagacatc
cgcgcctggtctcatggcgaggtcaagaagcccgaaaccatcaactaccgcacgctcaag
ccggaaaaggacgggctcttctgcgagaagatcttcggccccacccgggactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcgctgcggtgtc
gaggtcacgcggtccaaggtgcgccgtgagcgcatgggccacgtcgagctcgccgcaccc
gtgacccacatctggttcttcaagggtgtgccgtcccgcctgggctacctgctcgacctc
gcgccgaaggacctcgagaaggtcatttacttcgccgcgtacatgatcacgagcgtcgac
gaggccggtcggcacgaggacctccccaacctccagaacgagatcgacctggagaagaag
gagatcaccgaccgccgcgacaacgacatcgaggcccgcgccaagaagctcgaggccgac
ctggccgagctcgaggccgagggtgctcgcgccgacgcacgccgcaaggtgcgcgactcc
gccgagcgcgagatgacgcagctgcgcaagcgctcggacctcgagctcgagcgcctcgac
acggtctgggaccggttcaagaacctcaaggtcgctgacctcgagggcgacgagctgctc
taccgccagctgtcggaccgctacggcaactacttcgagggttcgatgggtgccgccgcg
atccagaagcggctgcaggccttcgacctcgaggccgaggccgagtcgctgcgcgacacg
atcaagaacggcaagggccagcgcaagacgcgcgcgctcaagcggctcaaggtcgtcaac
gcgttcctcaccacgtcgaacacgcccgagggcatggtcctggacgccgtcccggtcatc
cccccggacctgcgcccgatggtccagctggacggtggccgcttcgcgacctccgacctc
aacgacctgtaccgccgcgtgatcaaccggaacaaccgcctcaagcggctgctcgacctc
ggtgcgcccgagatcatcgtcaacaacgagaagcggatgctccaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggacgcccggtgaccggaccgggcaaccgcccgctcaag
tccatctcggacatgctcaagggcaagcaggggcggttccgtcagaacctcctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgtggtctgcccaagcagatggcgctcgagctcttcaagcccttcgtcatgaagcggctc
gtcgacctcaaccacgcgcagaacatcaagagcgccaagcgcatggtcgagcgcgcccgc
cccgtggtctgggatgtcctcgaagaggtcatcacggagcacccggtcatgctcaaccgt
gcccccacgctccaccgtctcggcatccaggccttcgagccccagctggtcgagggcaag
gcgatccacctgcacccgctcgtctgcggcgcgttcaacgccgacttcgacggtgaccag
atggccgtgcacctgcccctgagcgcggaggcccaggccgaggcccggatcctcatgctc
tcgagcaacaacatcctcaagccgtccgacggacgtcccgtgaccatgccctcccaggac
atgatcatcgggctgtaccacctgacgtcggacaaggcggacgccctgggcgccggccgg
gccttcagctcggtctccgaggcgatgatggcgttcgatgctcacaccatcgacctgaac
gccgagatcctcatccgcctcgaggacttcatcccgcccgtggacggcttcgacgccccc
gagggctggaccggcgctgagccggtcatcttcggcacgacgctcggccgggccctgttc
aacgagttgctgcccgtggactacccgtacgagaacggcgtcgtcgacaagaagcgtctg
tcgacgatcgtcaacgacctcgccgagcggtacccgaaggtggaggtcgcggcgagcctg
gacgcgctcaaggcggccggcttcagctgggccacccgctcgggcgtcaccatctcgatc
tccgacgtgatcaccccggtcgagaaggccgcgatcctcgaggagcacgaggggcgcgcc
gccaaggtccagacccagtacgagaagggtctgatcaccgacgacgagcgccgccaggag
ctcatcgagatctggacccaggcgaccgacaaggtggccgaggcgatgcggacgaacttc
ccgccgagctcgaccatcttccggatggtcggttcaggtgcccgtggtaactggatgcag
gtccgtcagatcgccggtatgcgcggccttgtggcgaacccgaagggcgagatcatcccg
cgcccgatcaagtccaactaccgcgagggcctgtccgtccttgagtacttcatcgccacg
cacggcgcccgcaaggggctggcggacaccgcactgcggaccgccgactccgggtacctc
acgcgtcggctcgtggacgtctcccaggacgtcatcgtccgcgaggacgactgcggcacc
gagcgcggcctgaccatgacgatcggcgtcccggccggcgacggcaccctgcgccgccac
gacaaggtcgagacgagcgtctacacccggacgctcgccacgacggtcgaggtcgacggc
aaggttctcgggcactccggggacgacgtcggcgacgtgctcctcgacgccctgctcgcc
gccggggtcaccgagctcaagatccgctcggtcctcacgtgcgagtcgcgggtcggtacg
tgcgccaagtgctacggccggtcgctcgcgacgggcaagctcgtcgacatcggcgaggcc
gtcggcatcatcgcggcccagtcgatcggcgagcccggcacgcagctcacgatgcgtacc
ttccacaccggtggtgtggcctcggccgacgacatcacgcagggtctgccccgcgtgcag
gagctcttcgaggcccgcacccccaagggtgagggacccatcgcggagttctccggtcag
gtcacgatcgacgagtccgaccggacccgccgcatcgtgctcaccccggacgacggctcc
gaggagctcgcctacccgatcaccaagcggtctcgcctgctggtggccgacggcgatcac
gtcgaggtcggcacccagctcgtccagggcgccgtcgacccgaagaaggtgctgcgcatc
ctcggcccgcgggccacgcagaagcacctcgtcgatgaggtccaggaggtctaccgctcg
cagggcgtggacatccacgacaagcacatcgaggtcatcgtgcggcagatgctgcggcgc
gtgacggttctcgactccggtgactcggacctgctgcccggcgagctcgccgagcgtggc
cggttcgaggatgccaaccgccgtgcggtcgcggagggtggccagccggcctcgggtcgt
cccgagctcatgggcatcaccaaggcctcgctcgcgaccgactcgtggctctcggcggcc
tccttccaggagaccacccgcgtgctgaccgaggcgtcgatgagcggccgcagcgacccg
ctgctgggcctcaaggagaacgtcatcatcggcaagctcatcccggcaggtaccggtctt
ccccggtacggcaacgtgtcggtcgagcccaccgaagaggcgaaggctgagctgtacccg
agcttcgggtacgacgagatcgacttccccgccctgggcctcggctcgggcgaagcgatc
ccgctggaagacctcgacttcggggacttccgctga |
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