Pengzhenrongella phosphoraccumulans: VTA80_12810
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Entry
VTA80_12810 CDS
T10828
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pphp Pengzhenrongella phosphoraccumulans
Pathway
pphp03420
Nucleotide excision repair
pphp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pphp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VTA80_12810 (pcrA)
03430 Mismatch repair
VTA80_12810 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphp03400
]
VTA80_12810 (pcrA)
Enzymes [BR:
pphp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VTA80_12810 (pcrA)
DNA repair and recombination proteins [BR:
pphp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VTA80_12810 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
VTA80_12810 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_11
AAA_30
Viral_helicase1
ResIII
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
WVT78451
LinkDB
All DBs
Position
2766206..2768836
Genome browser
AA seq
876 aa
AA seq
DB search
MNSLFANLPLPGLSRSELGASASAAAALAAAAVAPHTVVPSAVVSNTGVANAVVPDGDRD
VPARGRKAASGTPSDSTASDSSESDTSPAAAPSVRDPESLLVGLNPQQREAVLHSGGPLL
IVAGAGSGKTRVLTHRIAYLLATRRARASEILAITFTNKAAAEMRERVETLVGPPARSMW
VSTFHSACVRILRKEHKTLGLRSSFSIYDSADSLKLMSMVARELDLDAKRYPPKVLISKI
SALKDELIDPETFARSSGSSEDAANEFDAVLGQAYARYQVRLQQAHALDFDDLIMTTVHL
LQAFPAVAEHYRRRFRHVLVDEYQDTNHAQYMLVRELAGITALVGGKVDAGEVDAAAQFP
PGELTVVGDADQSIYAFRGATIRNIVEFEADYPNARTILLEQNYRSTQNILSAANAVISR
NTGRKRKRLWTDSGAGPAIVGYVADNEHEEARFVAEEIDRLGDSDGVRPGDVAVFYRANA
QSRALEEVLIRVGLPYKVVGGTRFYERREVKDAVAYLRAIANPDDDVNLRRILNVPKRGL
GDRSEAMVQAFAERERISFGAGLDRIDEVPGLAARAVTGLRAFATMMSELRALAATGAGP
AEVLGAVLDRTGYLAELRASEDPQDAARVENLSELHAVASEFEVSEPDGDLADFLERVSL
VADSDQIPSDDDGDGAPKVDQGVVTLMTLHTAKGLEFPVVFLTGLEDGTFPHIRSLADDA
QLAEERRLAYVGLTRARERLYVSRAAVRTSWGMPNEFPASRFLDDLPEELVDWRRRESSM
AVLRSGAGYGSGYGGSAPKKRPVPPSPDAPKFGSATPRPAGDVPSLAIGDRVTHDSYGLG
TVVGVEGAGPNCVAKIDFGSDGTKRLLLRYSPVTKL
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgaactcactcttcgcgaaccttcctctgcccgggctcagccgcagtgagctcggtgcg
tcggcatccgctgctgccgcgctcgctgctgccgctgtggctccccacaccgtcgtgccc
agcgccgtcgtatcgaacacaggagtggccaacgccgtcgtgcccgacggcgatcgcgac
gtgcccgcccgcgggcgcaaggcggcgtcgggcactccgagcgattcgaccgcgagcgat
tcgagcgagagcgacacgagccccgccgcggccccgtcggtgcgcgatcccgagagcctg
ctggtcgggctcaacccgcagcagcgcgaggccgtgctgcactccggcgggccgctgctg
atcgtggccggcgccgggtcgggcaagacgcgcgtgctcacccaccggatcgcctacctg
ctcgccacgcgccgggcgcgcgcgagcgagatcctggcgatcacgttcaccaacaaggcc
gccgcggagatgcgcgagcgggtcgagacgctcgtcgggccacccgcgcggtcgatgtgg
gtctcgacgttccactccgcgtgcgtgcgcatcctgcgcaaggagcacaagacgctcggg
ctgcgctcgagcttctcgatctacgactcggccgactcgctcaagctgatgagcatggtc
gcgcgcgagctggacctggacgcgaagaggtacccgccgaaggtgctgatctcgaagatc
tccgcgctgaaggacgagctgatcgacccggagacgttcgcacgctcgtcggggtcgtcg
gaggacgccgccaacgagttcgacgccgtgctcggccaggcctacgcccgctaccaggtg
cgcctgcagcaggcgcacgcgctcgacttcgacgacctgatcatgacgacggtccacctc
ctgcaggcgttcccggccgtggcggagcactaccggcggcggttccggcacgtgctggtc
gacgagtaccaggacacgaaccacgcgcagtacatgctggtccgcgagctcgccggcatc
acggcgctcgtcggtggcaaggtcgatgccggtgaggtcgatgccgcagcgcagttcccg
cccggcgagttgaccgtggtcggcgacgccgaccagtcgatctacgcgttccgcggcgcg
acgatccgcaacatcgtcgagttcgaggccgactatccgaacgcgcgcacgatcctgctc
gagcagaactaccgctcgacccagaacatcctctccgcggccaacgcggtcatctcgcgc
aacaccggccgcaagcgcaagcggctgtggaccgactcgggcgccggaccggcgatcgtg
ggctatgtcgcggacaacgagcacgaggaggcgcggttcgtcgccgaggagatcgaccgc
ctgggcgactccgacggcgtgcggccgggcgacgtcgcggtgttctaccgcgccaacgcg
cagtcacgtgcgctcgaggaggtgctgatccgggtcgggctgccgtacaaggtggtcggc
ggtacgcggttctacgagcgtcgcgaggtgaaggacgccgtcgcgtacctgcgggcgatc
gccaacccggacgacgacgtcaacctgcgccgcatcctcaacgtgcccaagcgcgggctc
ggcgaccgctccgaggcgatggtgcaggcgttcgccgagcgcgagcggatctcgttcggc
gccggcctcgatcgcatcgacgaggtgccgggcctggccgcccgcgcggtcacggggctg
cgcgccttcgccacgatgatgagcgagcttcgcgcgctggctgccacgggcgccggccct
gccgaggtgctcggcgccgtgctcgaccgcaccggctatctcgccgagctgcgcgcgagc
gaggacccgcaggacgccgcgcgcgtggagaacctctccgagctgcacgccgtggcgagc
gagttcgaggtgagcgagcccgacggcgacctggccgacttcctcgagcgcgtctcgttg
gtggctgactccgaccagatcccgagcgacgacgacggcgacggcgcccccaaggtcgac
cagggcgtggtcaccctcatgaccctgcacaccgccaagggcctcgagttcccggtcgtg
ttcctcaccgggctcgaggacggcacgttcccgcacatccggtccctggccgacgacgcc
cagctggccgaggagcgccggctcgcgtatgtcgggctgacccgggcccgggagcgtctg
tacgtctcgcgcgccgcggtgcggacctcgtggggcatgccgaacgagttcccggcgagc
cggttcctcgacgacctgcccgaggagctcgtcgactggcgtcggcgcgagtccagcatg
gccgtgctgcgctcgggcgccgggtatggctcgggctacggcggttcggcgccgaagaag
cggcccgtcccgccgtcgccggacgcaccgaagttcggttcggcgacgccgcggccggcc
ggagacgtgccgagccttgcgatcggcgaccgggtgacgcacgactcgtacgggttgggg
accgtcgtcggcgtcgaaggagcgggtccgaactgcgtcgcgaagatcgacttcggcagc
gacgggaccaagcggctgctgctgaggtactcgccggtcaccaagctatag
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