Pengzhenrongella phosphoraccumulans: VTA80_17455
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Entry
VTA80_17455 CDS
T10828
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pphp Pengzhenrongella phosphoraccumulans
Brite
KEGG Orthology (KO) [BR:
pphp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pphp03016
]
VTA80_17455 (truB)
Enzymes [BR:
pphp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VTA80_17455 (truB)
Transfer RNA biogenesis [BR:
pphp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VTA80_17455 (truB)
Prokaryotic type
VTA80_17455 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WVT79331
LinkDB
All DBs
Position
3788285..3789256
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AA seq
323 aa
AA seq
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MTGSVPGTRTHTEPGVRPPRRPTAADGLVVVDKPIGWTSHDVVARMRRVAGTRKVGHAGT
LDPMATGVLVLGIGRATRLLTYVVGADKEYVATIRLGVATTTDDAEGDLLTQTDASGITR
DAIDAVVAKLTGPIEQVPSSVSAIKVDGQRAYARVRAGEHVELASRPVTVARFDVHEVRT
EHLPDGAVLDVDVTVVCSSGTYIRALARDLGTALGVGGHLTALRRTRVGGYGLTGARTLD
ELEQLDPDVPLEVLSLADAARATFPVRDLTGEEAAALSYGKRIDVGQVRDGETVAAIAPD
GTLVALLTADGLHARPALVFAPA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaccggctcggtcccgggcacgcgcacgcacaccgagccgggagtgcgcccgccccgg
cgcccgacggcggcggacggcctggtcgtcgtcgacaaaccgatcgggtggacgagccac
gacgtcgtcgcgcggatgcgccgggtcgcgggcacgcgcaaggtcggtcacgccggcacg
ctcgacccgatggcgaccggggtcctggtgctcggcatcgggcgagccacccggctgctc
acctacgtcgtgggcgccgacaaggagtacgtcgccacgatccggctcggggtggccacc
accaccgacgacgccgagggcgatctgctgacccagaccgacgcgtccggcatcacgcgg
gacgccatcgacgccgtcgttgcgaagctgaccggcccgatcgagcaggtgcccagttcg
gtgagcgccatcaaggtcgacggccagcgcgcctacgcccgggtgcgggccggcgagcac
gtcgagctcgcctcccggccggtgaccgtcgcgcggttcgacgtgcacgaggtccgcacg
gagcacctgcccgacggcgccgtcctcgacgtcgacgtcaccgtcgtgtgctcgtcgggg
acctacatccgcgccctggcgcgcgacctggggacggccctcggcgtgggcggccacctc
accgcgctgcgccgcacgcgcgtgggcggctacgggctgaccggggcgcgcacgctcgac
gagctcgagcagctcgatccggacgtcccgctcgaggtgctctcgctcgcggacgccgcg
cgcgcgaccttcccggtacgcgacctcaccggcgaggaggcggccgcgctctcctacggc
aagcggatcgacgtcggccaggtgcgcgacggcgagacggtcgcggccatcgcgcccgac
gggacgctggtggcgctgctcaccgcggacggcctgcacgcccgcccggcgctggtgttc
gcgccggcctga
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integrated database retrieval system
