Entry |
|
Symbol |
dapF
|
Name |
(GenBank) diaminopimelate epimerase
|
KO |
|
Organism |
pphp Pengzhenrongella phosphoraccumulans
|
Pathway |
pphp01110 | Biosynthesis of secondary metabolites |
pphp01120 | Microbial metabolism in diverse environments |
|
Module |
pphp_M00016 | Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine |
|
Brite |
KEGG Orthology (KO) [BR:pphp00001]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VTA80_17645 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VTA80_17645 (dapF)
Enzymes [BR:pphp01000]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
VTA80_17645 (dapF)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
3831610..3832545
|
AA seq |
311 aa
MTMRFTKGHGTENDFVLLDDRAGVLDLTPELVRALTDRRAGIGGDGVIRVAPTASLPEGA
AILASDPGAVWFMDYRNGDGSVAEMCGNGVRVFAAYLERLGLAVVPGSGADDGAGLAVGT
RAGVRRVRREPNGWYAVDMGAWHLTGGDAAALAGTDAAVAVAGLAAVRPALRVDVGNPHV
VLALADADELAGADLTRAPEVRPEPRGGTNVELVVPLGEEVADDGSVVGRVRMRVHERGV
GETRSCGTGACAAALAVRTWAGAGAPDVWFVDVPGGTVRVRVLASGHVELAGPAALVAEG
EIDLAALVGTR |
NT seq |
936 nt +upstreamnt +downstreamnt
atgacgatgcgcttcaccaagggtcacggcaccgagaacgacttcgtgctgctcgacgac
cgcgccggggtgctcgacctgacccccgagctggtgcgtgcactcacggaccgccgggcc
ggcatcggcggcgacggggtgatccgggtcgcaccgacggcgtcgctgcccgagggggcg
gcgatcctcgcgagtgaccccggtgccgtgtggttcatggactaccgcaacggcgacggg
tcggtggccgagatgtgcggcaacggggtacgcgtcttcgcggcctatctcgaacgcctc
gggctcgcggtcgtgccgggatccggggccgacgacggcgccggcctcgcggtcggcact
cgcgccggggtgcgccgcgtgcggcgcgagccgaacggctggtacgccgtcgacatgggg
gcttggcacctcaccgggggcgatgcggccgcgctcgcgggtaccgacgccgccgtggcg
gtcgccgggctcgccgccgtgcgccccgccctgcgcgtcgatgtcggcaacccgcacgtc
gtgctcgccctcgccgacgccgacgagctggcgggtgccgatctcacccgcgctccggag
gtgcggcccgaaccccgcggcggcaccaacgtcgagctggtcgtcccgctcggcgaggag
gtggccgacgacgggtccgtggtcggtcgggtccggatgcgcgtgcacgagcgcggcgtc
ggcgagacccggtcgtgcgggaccggcgcgtgcgcggctgcgctcgccgtgcgcacctgg
gcgggtgccggtgcgcccgacgtctggttcgtcgacgtgccgggcggcaccgtgcgggtg
cgggtgcttgcgtccggccatgtcgagctcgcgggtccggccgcgctcgtcgccgagggc
gagatcgacctggccgcgctcgtcggcacccggtga |