Pengzhenrongella phosphoraccumulans: VTA80_17825
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Entry
VTA80_17825 CDS
T10828
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pphp Pengzhenrongella phosphoraccumulans
Pathway
pphp00470
D-Amino acid metabolism
pphp00550
Peptidoglycan biosynthesis
pphp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pphp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VTA80_17825 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VTA80_17825 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pphp01011
]
VTA80_17825 (murD)
Enzymes [BR:
pphp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
VTA80_17825 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pphp01011
]
Precursor biosynthesis
Amino acid ligase
VTA80_17825 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
NAD_binding_7
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
WVT79399
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All DBs
Position
3870964..3872433
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AA seq
489 aa
AA seq
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MQPNEREPFEDPTDLTGRRVVVAGLGMSGRAAVVALSARGAVVETVDARQPDADAADAAT
FVAEGRLDRADLVVASPGWAPSNPLLAAAVARGLPVWSEVELAWRFRAQRPDGAGPAPWL
AVTGTNGKTTCVGMLESILRAGGEHALAVGNVGVPVVAAVADPTLDVVAVELSSFQLHFT
RTMSTQAAAVLNVAPDHLDWHGSFEAYTHDKGRVYSQAQVACVYNAADPLTEQLVRDADV
RDGALAVGFTLGTPGVGQVGLVEDVLVDRAFAALRHTHAIELATLDDLAHLGSADAVDPR
CGSVPSHVVADALAAAALALAHGVDPSAVRAGLRAFAPGAHRIQTVATVDGVPYVDDSKA
TNAHAAAASLAAFSPGTVVWLAGGLAKGNTFDELVLARRDRLRAVVLIGVDQQPLREALA
RHAPEVPVVCIDPGETGSVMTRAVEQAHRFARQGGTVLLAPACASMDQFTSYAERGDAFA
AAARALTVH
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccaacgaacgcgagccgttcgaggacccgactgatctgaccggccgacgggtc
gtggtggccggcctgggcatgtctgggcgggcggccgtggtcgctctgtccgcgcgcggc
gccgtcgtcgagacggtcgacgcgcgccaaccggacgccgacgccgccgacgccgccacc
ttcgtcgctgagggccggttggaccgcgcggacctcgtcgtcgcctcgcccggctgggct
ccgtcgaacccgctgctcgcggcggcggtcgcgcgcggcctgccggtgtggagcgaggtc
gagctcgcctggcggttccgggcccagcggccggacggcgccggaccggccccctggctc
gcggtcaccggcacgaacggcaagacgacctgcgtcggcatgctcgagtcgatcctgcgc
gccgggggcgagcacgcgctcgccgtcggcaacgtgggcgtgcccgtcgtggcggccgtc
gccgacccgaccctcgacgtcgtcgcggtcgagctgtccagcttccagctgcacttcacc
cggacgatgtcgacccaggctgcggcggtgctcaacgtggcacccgaccacctcgactgg
cacggctcgttcgaggcgtacacgcacgacaaggggcgggtctactcccaggcccaggtc
gcgtgcgtgtacaacgcggccgacccgctcaccgagcagctggtccgcgacgccgacgtg
cgcgacggcgccctggccgtcgggttcacgctcggcaccccgggcgtcggccaggtcggg
ctcgtcgaggacgtgctcgtggaccgggccttcgccgcgcttcggcacacccacgcgatc
gagctggcgacgctcgacgacctcgcgcacctcggcagcgccgacgcggtcgacccgcgg
tgcggctccgtgccgtcccacgtggtggccgacgcgctggccgcggccgcgctcgcgctc
gcgcacggcgtcgacccgtccgccgtccgggcgggcctgcgggcgttcgcgccgggagcc
caccggatccagacggtcgccaccgtggacggcgtgccgtacgtcgacgactccaaggcg
accaacgcgcacgccgcggccgcgtccctggcggccttctcgcccggcaccgtcgtgtgg
ctggccggcgggctcgccaaggggaacaccttcgacgagctcgtgctggcccggcgcgac
cggttgcgcgcggtcgtgctgatcggcgtcgaccagcagccgctgcgcgaggcgctcgcc
cgacacgcgcccgaggttcccgtggtctgcatcgatcccggcgagactgggtcggtgatg
actcgcgccgtggagcaggcccaccggttcgcccggcagggcggcaccgtgctgctcgcc
cccgcgtgcgcctcgatggatcagttcacgtcctacgccgagcggggcgacgcgttcgct
gctgctgctcgcgccctcacggtgcactga
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