KEGG   Pannonibacter phragmitetus: APZ00_00325
Entry
APZ00_00325       CDS       T04214                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pphr  Pannonibacter phragmitetus
Brite
KEGG Orthology (KO) [BR:pphr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pphr03400]
    APZ00_00325
Enzymes [BR:pphr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     APZ00_00325
    5.6.2.6  RNA 3'-5' helicase
     APZ00_00325
DNA repair and recombination proteins [BR:pphr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    APZ00_00325
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C Cas3-like_C_2 ResIII AAA_25
Other DBs
NCBI-ProteinID: ALV25710
UniProt: A0A0U3FHS9
LinkDB
Position
70760..73285
AA seq 841 aa
MTASSQDQLLPEQFRAWFTARGWSPREHQLALLDVLGRGQSALLIAPTGAGKTLAGFLPS
LVELTERGRPKPGTVQAMRQGVHTLYISPLKALAVDIARNLETPVAEMDLPVRIETRTGD
TPTHKRQRQKQAPPDILLTTPEQIALLLSDPAASGMFKGLKTIVLDELHALVTSKRGDLL
ALGLARLRRIAPDVRLVGLSATVAEPDDLRAYLVAQTDPDGRCLSELVTVSGGAAPDITI
LDTAERVPWAGHSARYALDDIYRLLKAHRVTLLFVNTRSQAESLFQDLWKINEDTLPIAL
HHGSLDVGQRRKVEAAMASGQLRAVVATSSLDMGIDWGDIDLVINVGAPKGASRLAQRIG
RANHRMDEPSRAVLVPANRFEVLECRAALEASTSGGQDTPPLRRGALDVLAQHILGMGCA
GPFDADELYAEIRETQTYRHLDRETFTRVLDFVATGGYALKSYDRYAKLKQGPDGQWRIT
HPRIAQQYRLNVGTIVEAPMLKVRLVRGKEQGRRTPLGRGGRVLGEIEEWFLEQLAPGDT
FLFAGEILRFESIIESEAYVSRAKAEKPMVPSYQGGKFPLSTYLADGVRRLLSEPDHWPA
LPDQVREWLELQRTKSLLPSRSGLLVETFPRAGKHYLVCYPFEGRLAHQTLGMLLTRRLE
RLGAKPLGFVANDYALAIWGLGDPDLLIRTGRLSLDALFEEDLLGDDLDAWLAESSLLKR
TFRYCAVISGLIERRHPGQEKSGRQVTVSSDLIYDVLRQHEPGHILLRATWNDAAEGLLD
ISRLGELLLRIKGRITHTHLARVSPLAVPVLLEIGREPIYGEAQESILAEAADDLIGEAM
A
NT seq 2526 nt   +upstreamnt  +downstreamnt
atgaccgcctcctctcaggatcagcttctgcccgaacagttccgtgcctggtttaccgcg
cgcggctggagcccgcgtgagcatcagctggccttgctggatgtgctgggccgcggacaa
tccgcgctgctcattgccccgaccggcgcgggcaagacgctggccggcttcctgccgagc
ctcgtcgagctgacggaacggggacggccgaagccgggcacggttcaggcgatgcggcag
ggcgtgcatacgctctacatttccccgctcaaggcgctggccgtcgatattgcccgcaat
ctggaaacgccggtggcggagatggacctgccggtgcggatcgagacgcgcaccggcgac
acccccacccacaagcgccagcggcagaagcaggcaccgcccgatatcctgctgacaacg
ccggaacagatcgccctgctgctgtccgaccccgcagcctccggcatgttcaagggcctg
aagaccatcgttctggatgaactccatgcgctcgtcacctccaagcgcggcgatctgctg
gcgcttgggcttgcccgcctgcgccgtattgccccggatgtgcggctcgtcggcctgtcg
gcaacggtggcagagccggatgacctgcgcgcctatctggtggcacagacggatccggat
ggccgctgcctgagcgagctggtcaccgtcagcggcggggcagcgccggatattaccatt
ctcgatactgcggagcgcgtgccctgggccgggcactcggcccgctatgcgctggatgac
atttaccggcttctcaaggcgcaccgggtgacgctgctgttcgtcaacacccgctcgcag
gccgaaagcctgtttcaggatctgtggaagatcaacgaggacaccctgcccatcgccctg
caccatggctcgctggatgtgggccagcggcgcaaggtggaggcggcgatggcctcgggc
cagctccgcgccgtggttgccacgtcctccctcgacatgggcatcgactggggggatatc
gatctcgtcatcaatgtgggcgcgccgaagggggcaagccgccttgcccagcgcatcggc
cgcgccaatcaccgcatggacgagccctcgcgtgccgttctcgtccctgccaaccgtttc
gaggtgctggaatgccgggccgcactcgaagcctccaccagcggcgggcaggacaccccg
cccctgcggcgcggcgcgctggatgtgctggcccagcacattctcggcatgggctgcgcc
gggccttttgatgccgatgagctctacgccgaaatccgcgagacgcagacctaccgccat
ctcgaccgggaaacctttacccgcgtgctcgatttcgtggccaccggcggctatgcgctg
aaaagctacgaccgctatgccaagctgaaacagggcccggacgggcagtggcgcatcacc
catccgcgcattgcccagcaataccggctgaatgtgggcaccattgtcgaagcccccatg
ctgaaggtgcggctggtgcgcggcaaggagcagggccgccgcacgccgctggggcgcggc
ggccgggtgctgggcgagatcgaggagtggtttctggagcagcttgctcccggtgacacc
ttcctctttgcaggcgagatcctgcggtttgaaagcatcatcgaaagcgaggcctatgtc
tcgcgggcaaaggccgaaaagccgatggtgccctcctatcagggcggcaagtttccgctc
tccacctatctggccgatggcgtgcggcggcttttgtccgagccggaccactggccggcc
ttgccggatcaggtgcgcgaatggctggaactgcagcggaccaagtccctcctgcccagc
cgcagcggcctgctggtggaaaccttcccgcgtgccggcaagcactacctcgtctgctat
cccttcgagggccgcctcgcccaccagacactcggcatgctgctgacccggcggctggag
cggctgggcgccaagccgctgggctttgtcgccaatgactatgcgctggcgatctggggg
ctgggggatccggatcttctcatccgtaccggccgtctatccctcgatgccctgttcgag
gaggatcttctgggcgatgacctggatgcctggctggcggagtccagccttttgaagcgc
accttccgctactgcgccgtcatttccgggttgatcgagcggcgccatccggggcaggag
aaatccggccgccaggtcacggtttcatccgatctcatctatgatgtgctgcgccagcac
gagccgggccatatccttctgcgtgcaacatggaacgatgcagcagaaggacttctggat
atctcccggcttggtgaacttcttttaaggatcaagggtcgaatcacgcatactcatctc
gcaagagtttcgccccttgcggttcctgttctgctggaaatcggaagagaacccatttat
ggcgaggctcaggaaagcatccttgcagaagctgcggatgatttgatcggggaggccatg
gcatga

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