Pannonibacter phragmitetus: APZ00_01440
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Entry
APZ00_01440 CDS
T04214
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pphr
Pannonibacter phragmitetus
Pathway
pphr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
APZ00_01440 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pphr03019
]
APZ00_01440 (groEL)
03110 Chaperones and folding catalysts [BR:
pphr03110
]
APZ00_01440 (groEL)
03029 Mitochondrial biogenesis [BR:
pphr03029
]
APZ00_01440 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pphr04147
]
APZ00_01440 (groEL)
Enzymes [BR:
pphr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
APZ00_01440 (groEL)
Messenger RNA biogenesis [BR:
pphr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
APZ00_01440 (groEL)
Chaperones and folding catalysts [BR:
pphr03110
]
Heat shock proteins
HSP60 / Chaperonin
APZ00_01440 (groEL)
Mitochondrial biogenesis [BR:
pphr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
APZ00_01440 (groEL)
Exosome [BR:
pphr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
APZ00_01440 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
APZ00_01440 (groEL)
Exosomal proteins of breast cancer cells
APZ00_01440 (groEL)
Exosomal proteins of colorectal cancer cells
APZ00_01440 (groEL)
Exosomal proteins of bladder cancer cells
APZ00_01440 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
ALV25905
UniProt:
A0A0L0J357
LinkDB
All DBs
Position
311171..312811
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDVKFGADAREKMLRGVDILANAVKVTLGPKGRNVVLDKAFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQSIVKEGAKAVAAGMNPMDLKRGI
DLAAAEAVKYLVSVSKKITTSEEVAQVGTISANGDVQVGKDIAEAMQRVGNEGVITVEEA
KSLETELEVVEGMQFDRGYLSPYFVTNAEKMLAELEKPYILLHEKKLSNLQAMLPVLEAV
VQSGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEDLGIKLESVTLDMLGRAEKVSISKENTTIVDGAGSKDDIAGRVAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEIEVKEKKDRVDDALNATRAAVEEGIVPGGGTALL
RAKAAVEKLSSDNADIQAGIKIVLRALESPIRQIVENAGVEGSIVVGKIQENNDVSFGFD
AQTETYVNMIEAGIIDPTKVVRTALQDAASVAGLLITTGAMVAELPKKDAPAMPGGGMGG
MGGMDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggacgtaaagttcggtgctgatgcccgcgaaaaaatgctgcgcggcgtc
gatatcctcgcaaacgccgtcaaggtgaccctcggcccgaagggccgcaacgtggtcctc
gacaaggccttcggcgctccgcgcatcaccaaggacggtgtgtcggttgccaaggaaatc
gagctggaagacaagttcgagaacatgggcgcccagatggtgcgcgaagtggcctcgaag
accaacgacatcgccggtgacggcaccaccaccgccaccgtgctggcccagtccatcgtc
aaggaaggtgccaaggccgttgccgccggcatgaacccgatggatctgaagcgcggtatc
gacctcgctgctgccgaagccgtgaagtacctggtgtcggtttccaagaagatcaccacc
tctgaagaagtcgctcaggtcggcaccatttccgccaacggcgacgtgcaggttggcaag
gacattgccgaagccatgcagcgcgtcggcaacgagggcgtgattaccgtcgaggaagcc
aagtctctcgagaccgagctggaagtcgtcgagggcatgcagttcgaccgcggctacctg
tccccgtacttcgtcaccaacgccgagaagatgctcgccgagctggagaagccctacatt
ctcctgcacgagaagaagctctccaacctgcaggccatgctgccggttctcgaagctgtg
gtgcagtcgggcaagccgctcctcatcatcgctgaagacgtcgaaggcgaagctctggcg
accctcgtcgtcaacaagctgcgcggcggcctcaagatcgctgccgtcaaggctccgggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctgaccggcggcacggtg
atctccgaagacctcggcatcaagctggagagcgtcacgctcgacatgctcggccgcgcc
gagaaggtctccatctccaaggaaaacaccaccatcgttgatggcgctggctccaaggac
gacatcgctggccgcgttgcacagatcaaggcgcagatcgaggaaaccacctcggactac
gaccgcgagaagctgcaggagcgtctggccaagctggctggcggcgtcgccgtcatccgc
gttggcggtgcaaccgagatcgaagtgaaggaaaagaaggaccgcgtcgacgacgccctg
aacgcgacccgtgcggccgtcgaagaaggcatcgtcccgggcggcggcaccgcgctcctg
cgcgccaaggctgctgtcgagaagctgtcctccgacaacgctgacatccaggccggcatc
aagatcgtcctgcgcgcccttgagtccccgatccgtcagatcgtcgagaacgccggcgtg
gaaggctcgatcgtcgtcggcaagatccaggagaacaacgacgtctccttcggcttcgac
gctcagaccgagacctatgtcaacatgatcgaagccggcatcatcgacccgacgaaggtc
gtgcgcactgccctgcaggacgccgcttccgtcgccggcctgctgatcaccaccggcgcc
atggttgccgagctgccgaagaaggacgctccggcaatgccgggcggcggcatgggcggc
atgggcggcatggacttctaa
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