Pannonibacter phragmitetus: APZ00_01875
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Entry
APZ00_01875 CDS
T04214
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pphr
Pannonibacter phragmitetus
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphr03400
]
APZ00_01875
Enzymes [BR:
pphr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
APZ00_01875
DNA repair and recombination proteins [BR:
pphr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
APZ00_01875
Prokaryotic type
APZ00_01875
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ALV25980
UniProt:
A0A0U3PED6
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All DBs
Position
complement(410261..411724)
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AA seq
487 aa
AA seq
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MPSQPRDRTTIVWFRQDLRLADNPALFEAAKAGAVVPVFILEEPKDCGETHPMGGASRWW
LHHALAALDESLGGRLVLMRGPAGKALEALVKETGASAVHWNRCYEPHAIARDKRLKADL
MAAGVEVRSFNGALLHEPWELETKTGGPFKVYSPFWRAALAKPVAAPLPVPEALDIPQVS
LSLPLSDFALLPVKPDWAAGWLDLWQPGERGAAARLAAFLEEGLDGYGELRNRPDLPNVS
RLSPHLHFGEISPRQIWTATRFHTEQHGHLQKDGDKFLSEIGWREFSYHLLYHFPHLPER
NWKPAFDAYPWAEDAAALKAWQKGLTGYPMVDAGMRELWATGYMHNRVRMLVASFLVKHL
RLHWHHGEAWFRDTLLDADLANNSASWQWVTGSGADAAPYFRIFNPVGQGQKFDPDGAYV
CRWCPELAKLPDEFLHCPHEAPERILKAAGVVLGRTYPRPIVDHTAARNAALSGYDAVKQ
AGLEAAG
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgccctctcagccacgtgaccgcacgacgatcgtctggttccgccaggacctgcgcctt
gccgacaatccggcgctgttcgaggctgcaaaggcaggcgccgtggtgccggtgttcatt
ctggaagaaccgaaggactgcggcgaaacccacccgatgggcggcgccagccgctggtgg
ctgcaccatgcgctggcggcgcttgacgagagcctgggcggcagactggtgctgatgcgc
gggcccgccggcaaggcgctggaggcgctggtcaaggaaacgggggcttctgccgttcac
tggaaccgctgctacgagccgcatgcgattgcccgcgacaagcggctgaaggcggatctc
atggccgccggtgtcgaggtgcgcagtttcaacggcgcgctgctgcatgagccctgggag
ctggagacgaagaccggcggccccttcaaggtctattcgcccttctggcgtgcagcgctg
gccaagcccgtggcagcgcctttgccggtgccggaggcgctggacattccgcaggtcagc
ctgtctctcccgctttcagacttcgcgctgctgccggtgaagccggactgggcggcgggc
tggctcgatctctggcagccgggcgaaaggggcgcggcagcgcggcttgcggcttttctg
gaggaagggctcgatggctatggcgagctgcgcaaccggccggacctgcccaatgtctcg
cgcctgtcgccgcatctgcatttcggcgaaatctccccccggcagatctggacggccacc
cgctttcacacggagcagcacggccacctgcagaaggatggcgacaagttcctgtcggaa
atcggctggcgggagttctcctatcatctgctctaccatttcccgcatctgcccgagcgc
aactggaagcccgccttcgatgcctatccctgggctgaggatgctgcggcgctgaaggcc
tggcagaaggggctgaccggctaccccatggtggatgcgggcatgcgcgagctgtgggcc
accggctacatgcacaaccgggtgcggatgctggtggcgtccttcctcgtcaagcatctg
cgcctgcactggcaccatggcgaggcctggttccgtgacacgctgctggatgcggatctc
gccaacaactccgccagctggcagtgggtgacgggcagcggcgccgatgccgcgccctat
ttccgcatcttcaatccggtggggcaggggcagaaattcgatcccgatggtgcctatgtg
tgccgctggtgcccggagctggccaagctgccggacgaattcctccactgcccgcacgaa
gcgcccgagcgcatcctgaaggcggcaggtgtcgttctggggcgcacctatccccgtccc
atcgtcgaccacacggctgcccgcaatgcggcactttccggctatgatgctgtgaagcag
gcggggcttgaagcggcggggtga
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