Pannonibacter phragmitetus: APZ00_03040
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Entry
APZ00_03040 CDS
T04214
Name
(GenBank) methylase
KO
K26273
protein strawberry notch
Organism
pphr
Pannonibacter phragmitetus
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pphr03036
]
APZ00_03040
Chromosome and associated proteins [BR:
pphr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
APZ00_03040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Clathrin_H_link
MTS
Motif
Other DBs
NCBI-ProteinID:
ALV26176
UniProt:
A0A0U3N914
LinkDB
All DBs
Position
complement(634619..638965)
Genome browser
AA seq
1448 aa
AA seq
DB search
MNMISVSAAASATVPVPLASDADIPASVFAAAQILLPHLERGQRIDAATLRGAMEIAFGA
SDATGAWNWKTAYDACEAATVLFLRKYGKALFRKSASPATVLPQFAKIAGLLPTHTCRSE
EAQSFQQFSTPIPLGLAAVTAAAITPADCVLEPSAGTGLLAILAEITGGSLVLNELAQTR
TGLLSLLFPALSISRFDAAQIDDHLEASLLPSVVLMNPPFSVMANVESRVADAAFRHIAS
ALARLAPGGRLVAITGANFAPDAPAWTSAYTRLQERGRVVFSTAIDGSVYAKHGTTYPTR
LTVIDKLPADDPAAFPAAPGVAPDVATLLGWLAEHLPTRLPVDPAVAVPPAAPAAARSVR
GYLTRAAKAAPAPAMAEPEGAPLDYETVDWSPAEGGRISDAIYEEYGLQAIRIRGSQAHP
TMLVQSAAMASVAPPKPAYRPHLPGAIHALLSDAQLETVIYAGEAHADYLAGSWTVDETF
DLVSAAREDAKNAVRFRRGFFIGDGTGVGKGRQSAAIILDNWLQGRRKAIWISKSDKLLE
DAQRDWSALGMERLLVTPLSRFPQGKPVTLPEGVLFTTYATLRSDDRGERVSRVKQIVQW
LGSDFDGVIIFDEAHAMQNAAGGKGERGDVAASQQGRAGLRLQHALPNARVVYVSATGAT
TVHNLAYAQRLGLWGGEDFPFSTRAEFVEAIEAGGVAAMEVLARDLRALGLYTARSLSFD
GVEYELVEHSLTPEQTRIYDAYAGAFAVIHNNLDAAMEAANITGSAGTLNKQAKSAARSA
FESAKQRFFGHLLTSMKTPTLIRSIDADLEAGHAAVIQIVSTGEALMERRLADLPTEEWN
DVRMDITPREYVLSYLETSFPVQLYEPFTDSEGNLSSRPVFRDGQPVESREAVARRTALI
EKLASLPPVPGALDQIVQYFGCDLVAEVTGRSRRIIRKPGTGDIGDRLVVENRAAAANLA
ETQAFMDDQKRILIFSDAGGTGRSYHAELSARNTRLRVHYLLEPGWKADAAIQGLGRTHR
TNQAQPPLFRPIATDVKAEKRFLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESHYA
RDALRQLYLLLVRGKVEGCSLDRFESATGLKLMDSTGIKDDLPPITTFLNRLLALTIELQ
GILFAAFEQLLNARIEGAIASGSYDVGLETLTAERFIVTDRQTIYTHPGTGAETRLLTIT
QRERNRPVTLDDALSYLDDRQAKLLINERSGRAAVQIPTTSIMLDDGEIERRVRLIRPMD
SHNIPVRMMGETHWVEADEHSFSAAWNAEIAEVPEFSDSTIHIVTGLLLPIWKRLPHESS
RVYRLQTDEGERIIGRKVSPAWAANAVTTGASSLTPDAAFTALMDGRTVLDLAEGLQLRR
SRVMGVSRIELSGFTDTMRERLTAYGLFHEIISWKLRMFVPVDANGPVVLGKLLDRWPVQ
RIGEREAA
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgatttccgtatccgcagcggcatccgcgacagtgccggttccgcttgcctcc
gacgctgacatccctgcctccgtcttcgccgcagcacagatccttcttcctcatctcgaa
cgtggtcagcgcatcgacgcagccacattgcgcggcgcaatggagattgcctttggcgca
tccgatgccactggcgcctggaactggaagacagcctatgacgcctgtgaggcggcaacc
gttcttttcctgcgcaaatacggcaaggcgcttttccgtaaatccgcctctccggcaacg
gtgctgccacagttcgccaagattgccggtctcctgccgacgcatacgtgccgctctgaa
gaggcgcagtccttccagcaattctcgaccccgattccgctcggcctggcggccgtgacg
gcggcggcgatcacgccggcagactgtgtgctggaaccgtcggcagggaccgggctcctc
gccatcctggccgagatcacaggcggctcactcgttctcaatgaactcgcccagactcgc
accggtctcctgtctctcctcttcccggccctgtccatctcccgcttcgatgccgcccag
atcgacgatcatctcgaagccagccttctgccgtccgtcgtgctgatgaacccgccgttc
tcggtcatggccaatgtcgagagccgtgtggccgacgccgccttccgccatatcgcctcg
gcgctggcgcgtcttgcgcccggcggccgcctcgtcgcgattacaggagcgaacttcgca
cccgacgcgccggcctggacctcggcctatacgcgtctgcaggagcgcggccgcgtcgtc
ttctccaccgcgattgacggctcggtctatgccaagcacggcacgacctatccgacacga
ctcaccgtcatcgataagctcccagctgacgatcctgccgcattccctgccgcgcccggc
gtcgcgcccgatgtcgccacgctgctcggatggctcgccgagcatctgcccacccggctc
cccgtcgatccggccgtcgccgtgcccccggctgcgccagccgccgcccgcagcgtgcgg
ggctatctcacccgcgccgccaaggccgctcccgccccagcgatggccgaaccggaaggc
gcgcccctcgactacgagaccgtcgattggtcgcccgcggagggcggccgcatctccgac
gctatctatgaagaatacggattgcaggcgatccgtattcgcggctctcaggcgcatccc
accatgctggtgcagtcggcggcgatggcctccgtagcgccgccgaagccggcctatcgc
ccgcatcttccgggcgcgatccatgccctcctgtcggatgcgcagttggagaccgtaatc
tacgccggcgaggcccatgccgattatctcgccggttcgtggacggtggacgagaccttc
gatctcgtctccgccgcacgcgaagatgcgaagaatgccgtgcgtttccggcgtggcttc
ttcatcggcgatggcaccggcgtcggcaagggcaggcaatcggccgcgatcattctcgac
aactggctccagggccgccgcaaggcgatctggatctccaagtccgacaagctcctggag
gacgcccaacgcgactggtcggcgctcgggatggagcgtctgctggtcacgccgctgtcg
cgattcccgcagggcaagccggtcacgctgccggaaggcgtcctatttacaacctatgcc
acgctacgttccgacgaccgtggagaaagggtttccagggtcaagcagatcgtccaatgg
ttgggctccgacttcgatggagtgatcattttcgacgaggcgcacgcgatgcagaacgcc
gccggcggcaaaggtgaacgaggggacgtcgctgcgtcccaacagggccgcgccggcctg
cgccttcagcacgccttgccgaatgcccgagtcgtctatgtctcggcaaccggcgccacg
accgtccataacctcgcctatgcgcagcggctcggcctgtggggcggcgaggattttccg
ttttccacgcgggccgagttcgtggaggcgatcgaggccggcggtgttgcggcgatggag
gttctggcccgcgaccttcgcgcgctcggtctttataccgcccgctcgctctccttcgac
ggcgtggaatacgagctggtcgagcactcgctgacgcccgagcagacccgcatctacgac
gcctatgccggcgcattcgccgtcatccataataatctcgatgcagcgatggaggcggcc
aacatcaccggcagtgccggcactctgaacaagcaggcgaaatccgccgcccgttccgcg
ttcgaatcggccaagcagcggttcttcggccatctgctcaccagcatgaagaccccgacg
ctgatccggtccatcgacgccgatctggaggcaggccatgccgccgtgatccagatcgtc
tcgaccggcgaggcgctgatggagcgccgcctggccgacctgccgaccgaggaatggaac
gacgtacgcatggacattactccgcgtgagtacgtcctgtcgtatctggaaaccagcttc
ccggtgcagctctacgagcccttcaccgactcagagggtaatctgtcctcgcgtccggtg
ttccgcgacggccaacccgtcgaaagtcgtgaggcggttgcacgccgcaccgcactgatc
gaaaagctggccagcctgccgccggttccgggcgcgctcgaccagatcgtccagtatttc
gggtgcgatctcgtcgcggaggtgactggccgctcgcgccgcatcatccgcaagccgggc
accggtgacatcggcgaccggctcgtggtcgagaaccgcgcagcagcagccaatctcgcc
gagacgcaggcgttcatggacgaccagaaacgcatcctgatcttctcggatgcaggcgga
accggccgcagttaccacgcggagctatcggcgcggaatacgcggctgcgcgtgcattac
ctgctcgagccgggctggaaggccgacgccgccatccagggcctcggtcgcacgcatcgc
acgaaccaggcgcagccgccgctcttccggcccatcgcgaccgacgtcaaggccgagaag
cgttttctctccaccatcgcccgacgtctcgatacactcggcgcgatcacgcgcggtcag
cgccagactggcggacagggcctcttccgacccgaggacaatctggagagccattatgcc
cgcgacgcgctgcgccagctctatctccttctggtccgcggcaaggtcgaaggctgctcg
ctcgaccgcttcgaatccgccaccggcctgaagctgatggattcgaccggcatcaaggac
gatctgccgccgatcaccacctttctcaaccggctgctggcgctgaccatcgagcttcaa
ggcatcctgtttgccgccttcgaacagttgctgaacgccaggatcgagggcgcgatcgcc
agcggcagctacgatgtcgggctggagacgctgacggcggaacgcttcatcgtcaccgat
cgccagaccatctatacccatccgggcaccggcgcggaaacccggttgctgacgatcacg
cagcgcgaacgcaatcgtccggttacgctggacgatgcgcttagctatctcgacgaccgc
caagcgaagctcctcatcaacgagcgttcgggccgcgccgccgtccagatcccgaccacc
agtatcatgctggacgatggcgagatcgagcggcgcgtacggctgatccggccgatggac
agccacaacatcccagtcaggatgatgggtgagacccattgggttgaagccgacgagcac
tccttctcagcagcctggaatgcagaaatcgcggaggtgccggaattctccgacagcacg
atccatatcgtcaccggcttgctgctgccgatctggaaacggcttccgcacgaatcctcg
cgcgtctatcgcctccagaccgacgaaggcgagcgcatcatcggtcgcaaggtctcgccg
gcctgggcggccaacgcggtaacgaccggcgccagttcgctgacgccggatgccgccttc
accgcactgatggatggccgcaccgtcctcgatcttgccgaggggttgcagcttcgccgc
tcccgcgtcatgggcgtcagccgcatcgaactgtctggtttcaccgacacaatgcgcgaa
cgcctcacggcctacgggctgtttcatgagatcatctcgtggaagctgcgcatgttcgtg
ccggtcgatgccaatggccctgtggttctcggcaaactgctcgaccgctggccagtgcag
cgcatcggtgaacgggaggcagcgtaa
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