Pannonibacter phragmitetus: APZ00_03160
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Entry
APZ00_03160 CDS
T04214
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pphr
Pannonibacter phragmitetus
Pathway
pphr00300
Lysine biosynthesis
pphr01100
Metabolic pathways
pphr01120
Microbial metabolism in diverse environments
pphr01230
Biosynthesis of amino acids
Module
pphr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
APZ00_03160
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pphr01002
]
APZ00_03160
Enzymes [BR:
pphr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
APZ00_03160
Peptidases and inhibitors [BR:
pphr01002
]
Metallo peptidases
Family M20
APZ00_03160
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ALV26195
UniProt:
A0A0U3PBD6
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All DBs
Position
complement(660328..661497)
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AA seq
389 aa
AA seq
DB search
MTQALSPAVAIARDLIRCPSVTPAEGGALAFLERLLGEAGFTVSRVTFSDTDTPDVENLF
ATIGSGAPHFVFAGHTDVVPAGAESDWQHDPFGGEIRDGVLYGRGAVDMKGGIASFAAAA
LAFIAERGKAFGGTISFLITGDEEGPAVNGTSKLLAWAKEQGYVFDACIVGEPTNPAALG
DAIKIGRRGYLSGIVTVEGTQGHAAYPQLADNPIPGLLALMSALDALVLDTGNERFEPSN
LEIVNLHVGNPAFNVIPARAEGRFNIRFNDEWTLDALKARLHETLATAARPGLRYSLDFR
RDAGESFLTRDDALITALANAVEAVTGRRPDLTTNGGTSDARYIKSYCPVVEFGLVGQTM
HKVDECTPVADLDQLAAVYRRFLDSYFAG
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagctctgtctcccgccgtcgccatcgcccgcgatctcatccgctgcccctcc
gtcacgcccgccgaaggcggcgcgctggcgtttctggagcgtctgctgggtgaggcaggc
ttcaccgtctcccgcgtcaccttctccgacacggatacgccggacgtggaaaacctcttt
gccacgatcggcagcggcgcgccgcatttcgtctttgccggccacacggatgtggtgcct
gcaggtgcggaaagcgactggcagcatgaccccttcggcggcgaaatccgcgacggcgtg
ctctacgggcgtggcgcggtggacatgaagggcggcatcgcctccttcgcggctgctgcg
ctggccttcatcgcagagcgcggcaaggcattcggcggcaccatttccttcctcatcacc
ggtgacgaggagggcccggcggtgaacggcacgtcgaagcttctcgcctgggcgaaggag
cagggatacgtctttgatgcctgcatcgtcggcgagccgaccaatccggccgccctgggt
gatgccatcaagatcggccgccgtggctatctctccggcatcgtcacggtggaaggcacg
caagggcacgcggcctatccgcagctcgctgacaacccgatccccggcctgctggcgctg
atgagtgcgctggatgcgctggtgctggacacgggcaacgagcggttcgagccgtcgaac
ctcgagatcgtcaacctgcatgtgggcaatccggcgttcaacgtcatcccggcccgcgcc
gaggggcgcttcaacatccgcttcaacgacgaatggacgctggatgcactgaaggccagg
ctgcatgagacgctggctacggctgcccggcccggtctgcgctacagtctcgacttccgc
cgcgatgcgggcgaatccttcctcacccgtgatgatgcgctgatcacggcgctggccaat
gccgtggaagcggtgacaggccgccgcccggatctgaccaccaacggcggcacgtcggat
gcccgctacatcaagagctactgcccggtggtggaattcggccttgtcggccagaccatg
cacaaggtggatgaatgcacgccggtcgccgatctcgaccagctcgctgccgtctaccgc
cgcttcctcgacagctatttcgcgggttga
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