Pannonibacter phragmitetus: APZ00_04895
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Entry
APZ00_04895 CDS
T04214
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pphr
Pannonibacter phragmitetus
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphr03400
]
APZ00_04895
Enzymes [BR:
pphr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
APZ00_04895
DNA repair and recombination proteins [BR:
pphr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
APZ00_04895
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
CDI
Motif
Other DBs
NCBI-ProteinID:
ALV29867
UniProt:
A0A0U3NET5
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All DBs
Position
1028616..1030136
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AA seq
506 aa
AA seq
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METLVPVLGDQLSLNLPSLAAADRERSVVLMAEVMREASYVGHHKQKIAFIFSAMRHFAI
ALRKAGWRVDYITLENPDNTGSLAGEVQRAAARHGCGRVLATKPGEWRVLEDMSGWGALT
GCETVLLEDTRFLCPLDEFAAWAEGRKQLRMEYFYREMRRKTGLLMEGDEPAGGRWNFDA
ENRKPAEGSLFLPRPFRAVPDAVTKEVLALVAQRFAQNFGRLEGFAYGVTAQDAQAALEW
FLREALPCFGDYQDAMLKGEAWLYHSVLSPYLNTGLLDPLEVCRRVEDEWRAGRVPLNSA
EGYIRQIIGWREYVRGLYWLKMPGYTDENALAAHRPLPAFYWTGETDMLCLREAITQTRD
TAYAHHIQRLMVTGNFAMLAGINPREVHEWYLAVYIDAFEWVEAPNTIGMSQFADGGLLG
SKPYAAGGNYINRMSDYCGSCRYDVKQRTGRDACPLNALYWDFLVRNGEKLRGNPRLAQV
FRTYGKMAEEAKRDLHRQASAFLKAL
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
gtggagacgcttgtgcccgtgctgggtgaccagctgtcgctgaacctgccctcgcttgcc
gccgcagacagggaacggtctgtggtgctgatggcggaggtgatgcgcgaggcgagctat
gttggtcatcacaagcagaagatcgccttcatcttctcggccatgcgccactttgccatt
gctctgcgcaaggccggctggcgggtggactacatcacgctggagaacccggacaatacg
ggcagccttgccggagaggtgcagcgggcagccgcgcgccatggctgcggcagggtcctc
gccacaaagcccggggaatggcgggtgctggaggacatgagcggctggggcgcattgacc
ggatgcgaaaccgtgctgctggaggacacccgcttcctctgcccgctggatgagtttgcc
gcctgggcggaagggcgcaagcagctgcgcatggaatatttctaccgcgagatgcggcgc
aagaccggccttttgatggagggagacgaaccggcaggggggcgctggaactttgatgcg
gagaaccgcaagccggcggaaggcagcctgtttctgccgcggcccttccgggccgtgccc
gatgcggtgacgaaggaggtgctggcgctggtggctcagcgctttgcgcagaatttcggg
cggctggagggctttgcctacggcgtgacggcgcaagacgcgcaagcagcgctggagtgg
ttcctgcgcgaggcgctgccttgcttcggcgactatcaggacgcgatgctcaagggcgag
gcctggctctatcattcggtgctctcgccctatctcaacaccgggcttctcgatccgctg
gaggtctgccgccgggtggaggacgaatggcgggccgggcgggtgccgctcaattcggcg
gaaggctatatccgccagatcatcggctggcgcgaatatgtgcgggggctctactggctg
aagatgcccggctatacggacgaaaacgcgctggcagcgcaccggcccctgccggccttc
tactggacgggcgaaacggacatgctctgtctgcgcgaggccatcacccagacgcgcgac
acagcctatgcccatcacatccagcggctgatggtgaccggcaatttcgccatgctggct
gggatcaacccgcgcgaggtgcatgaatggtatctggcggtctacatcgacgctttcgaa
tgggtggaggcgcccaacaccatcggcatgagccagtttgccgatggcgggctgctcggc
tccaagccctatgcggcggggggcaactacatcaaccgtatgtcggattattgcggcagc
tgccggtatgacgtgaagcagcggacggggcgcgatgcctgcccgctcaatgcgctctat
tgggactttctggtgcgcaatggcgaaaagctgcgcggcaatccgcgtctggcacaggtc
ttccgcacatacggcaagatggcggaagaggccaaacgcgatctgcaccggcaggcttcc
gctttcctcaaggcgctttaa
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