Pannonibacter phragmitetus: APZ00_05025
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Entry
APZ00_05025 CDS
T04214
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pphr
Pannonibacter phragmitetus
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pphr03016
]
APZ00_05025
Enzymes [BR:
pphr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
APZ00_05025
Transfer RNA biogenesis [BR:
pphr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
APZ00_05025
Prokaryotic type
APZ00_05025
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ALV29873
UniProt:
A0A0U3EEB2
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All DBs
Position
complement(1058249..1059184)
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AA seq
311 aa
AA seq
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MSRPQKQRRPRNAIDGWLVLDKPYGLTSNDALSRLKRILHPEKVGHAGTLDPRASGCLPI
AFGEATKTVPMVMNGRKIYRFEVTWGAETNTDDTEGEVIATSDVRPDAAAIGAVLPEFTG
TILQVPPKFSAIKVDGERAYDLARDGEDVELEARPIDVHRLTLVDMPDADRAVFEAECGK
GTYVRALARDLGRRLGTCGHVTELRRLLVGPFGEADMVTLEELNEAAEEAEGNVEALMDF
LLPVREALEDLPEVPVRSDDAARIRQGMAVLLRGRNAPLSCDLAFASHGGTPVALGFIDK
GRFQPSRILHL
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtccgcagaagcagcgccgcccgcgcaacgccattgacggctggctggtgctc
gacaagccctatggcctgacctctaatgacgccctgtcgcgcctgaagcgcatcctgcat
ccggaaaaggtgggccatgccggcacgctggacccgcgtgcatccggctgcctgcctatt
gccttcggcgaagcgaccaagaccgtgcccatggtgatgaacgggcgcaagatctaccgc
tttgaagtcacctggggcgcggaaaccaacacggacgacaccgaaggcgaagtcatcgcc
acctcggatgtgcggccggatgctgccgccatcggcgccgtgctgccggaattcaccggc
accatcctgcaggtgccgccgaaattctcggccatcaaggtggacggcgagcgcgcctat
gatcttgcccgcgacggcgaggacgtggagctggaagcccggcccatcgacgtgcaccgc
ctgacgctggtggacatgccggacgcggatcgcgccgtcttcgaggcagaatgcggcaag
ggcacctatgtgcgggctctggcgcgcgaccttggccgccgtcttggcacctgcggccat
gtcaccgagctgcgccgcctgctggtcgggccttttggcgaagccgacatggtgacgctg
gaggagctgaacgaagctgccgaagaggcggaaggcaatgtggaggccctgatggacttc
ctgctgccggtgcgcgaggcgctggaggacctgccggaagtgccggtccgcagcgacgat
gccgcccgcatccgccagggcatggcggtgctgctgcgcgggcgcaatgcgccgctgtcc
tgcgatctggccttcgccagccatggcggcacgccggtggcactcggcttcatcgacaag
ggccggttccagccttcgcgcattcttcacctttag
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