Pannonibacter phragmitetus: APZ00_05045
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Entry
APZ00_05045 CDS
T04214
Name
(GenBank) transcription elongation factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
pphr
Pannonibacter phragmitetus
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pphr03021
]
APZ00_05045
03009 Ribosome biogenesis [BR:
pphr03009
]
APZ00_05045
Transcription machinery [BR:
pphr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
APZ00_05045
Ribosome biogenesis [BR:
pphr03009
]
Prokaryotic type
rRNA transcription factors
APZ00_05045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KH_NusA_C
KH_1
Ribosomal_S17e
Phytoreo_P8
Motif
Other DBs
NCBI-ProteinID:
ALV26522
UniProt:
A0A0U2W1S5
LinkDB
All DBs
Position
complement(1063358..1064983)
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AA seq
541 aa
AA seq
DB search
MAISANRLELLQIADAVAREKTIDRGIVIAAMEDAIQKAARSRYGTETEVRAEINPKTGE
IRLQRLLQVVETVENFSTEIALEDAKQRNPEATIGDYIAEPLPPLDFGRIAAQSAKQVIV
QKVREAERDRQFDEFKDRIGEVVNGTVKRAEYGNVIVDLGRGEGIVRRDELIPRELFRTG
DRIRAYIYDVRREQRGPQIFLSRTHPQFMAKLFAQEVPEIYDGVIEIKAVARDPGSRAKI
AVISKDSSIDPVGACVGMRGSRVQAVVGELQGEKIDIIPWNPDEATFIVNALQPAEVAKV
VVDEDAERIEVVVPDEQLSLAIGRRGQNVRLASQLTGWAIDIMTEQEESERRQKEFQERS
TLFMECLNVDEMVGQLLATEGFTSVEEVAYVDLEEISMIEGFDDDTAEEIQARARDYLAE
LEAKQDEERRALGVADELRQIDGLTTAMLVALGKEGIKTIEDLAGCAADDLVGWTERKDG
ETKRFDGALSSFAVSRTDAEGMVMAARLAAGWITEEELAAHMGTFEEEAEDGEEEDAGET
A
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggctatcagcgcgaaccggctggaactgctccagatcgccgatgcggttgcccgggaa
aagacgattgaccggggcatcgtgatcgctgccatggaggacgccatccagaaggcggcc
cgttcccgttacggcaccgagacggaagtgcgcgcagagatcaatccgaagaccggtgag
atccgtctgcagcgcctgctccaggtggtcgagacggtggagaatttctccaccgagatc
gcgctcgaggatgccaagcagcgcaacccggaagccacgatcggcgactatatcgccgag
ccgctgccgccgctcgacttcggccgcattgccgcccagtccgccaagcaggtgatcgtg
cagaaagtgcgcgaggccgagcgtgaccgtcagttcgacgagttcaaggaccgtatcggc
gaagtggtcaacggcacggtcaagcgcgccgaatatggcaacgtcatcgtcgaccttggc
cgcggtgaaggcatcgtccgccgtgacgagctgatcccgcgcgagctgttccgcaccggt
gaccgcatccgtgcctatatttacgacgtgcgccgcgaacagcgcggcccgcagatcttc
ctgtcgcgcacccatccgcaattcatggcgaaactctttgcgcaggaggtcccggagatc
tatgatggcgtcatcgagatcaaggccgtggcccgtgacccgggttcgcgtgccaagatc
gccgtcatttccaaggacagctccatcgacccggtcggcgcctgcgtcggtatgcgcggc
tcgcgtgttcaggccgtggtgggcgagcttcagggcgagaagatcgacatcattccgtgg
aacccggatgaggcgaccttcatcgtcaacgccctgcagccggcggaagtcgccaaggtc
gtggtggacgaggatgccgagcgcatcgaggtcgtggtgccggacgagcaactgtcgctg
gccattggccgccgcggccagaacgtgcgcctggcttcgcagctgaccggctgggccatc
gacatcatgaccgagcaggaggaaagcgagcggcgccagaaggaattccaggagcgctcc
accctgttcatggaatgcctcaacgtggacgagatggttggccagctgctggcgaccgaa
ggcttcacgtcggttgaggaagtggcctatgtcgatctcgaggaaatctcgatgatcgaa
ggcttcgatgatgacaccgccgaggaaatccaggcccgtgcccgtgattacctcgccgag
ctggaagccaagcaggacgaggagcgccgcgctctgggtgttgccgacgagctgcgccag
atcgatggcctgaccaccgcgatgctggttgccctgggcaaggagggcatcaagacaatc
gaggatctggcgggttgcgccgcggatgatctggttggctggactgagcgcaaggacggc
gagaccaagcgtttcgacggcgccctgtcgtccttcgcagtgtcacgcactgacgccgag
ggcatggtcatggctgcacgccttgcggcaggctggatcaccgaggaagaacttgcggcc
cacatgggcaccttcgaggaagaggcggaagacggcgaagaagaagacgctggcgagacc
gcctga
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integrated database retrieval system
