Pannonibacter phragmitetus: APZ00_05605
Help
Entry
APZ00_05605 CDS
T04214
Name
(GenBank) DNA helicase UvrD
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
pphr
Pannonibacter phragmitetus
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphr03400
]
APZ00_05605
Enzymes [BR:
pphr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
APZ00_05605
DNA repair and recombination proteins [BR:
pphr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
APZ00_05605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
DEAD
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
ALV26621
UniProt:
A0A0U3PHD4
LinkDB
All DBs
Position
complement(1182951..1186469)
Genome browser
AA seq
1172 aa
AA seq
DB search
MSGPQIPLATLQRQDLASRPHASAWVSANAGSGKTFVLSRRVVRQLLDGTDPSRILCLTF
TKAAAAEMATRVFKILGQWIALSDDELAKEIAAIDGTPPSRARLAGARRLFAQALETPGG
LKIQTIHAFCEALLHQFPLEANVAGHFSVLDDRLAAELMAEARAFMLHAAETEPESPLGA
ALQRLIGLMPDAAVEEVLAEAINRRDALRNWIVSAGDLDAALESLARDFGLEPEASLEAL
EEELREARLIRDPLAFAEALRQGTKTDGDKADLLTAAAAALKPGGDHAAFRHNWLRAFFT
QAMEPAKRLCTAGVTKQFPQVAEDMLAEQARLVALLEKRRAIVTLEGTAAIFRLADGVIG
HYEAGKARRGLLDFEDLVVRAANLLANSDAALWVQFKLDQGLDHILVDEAQDTSPRQWQV
IRSLAEEFFSGEGARRGPRTIFAVGDEKQSIYSFQGAVPAYFDEMRRYFDKRAAQADQPF
HPVELQLSFRSTPDVLGAVDRVFLPAEAHAGLSQEVKPPVHEAIRRDPGLVEIWPLEEPL
ESEEPEDWTLPVDHLGTGSPMLRVAKRIAATLRRWMDEGTAGPGDVMILVRKRGPFVEAL
NREMKRLGVPAAGSDRLVLTEHIAVMDLVALGRFMLLPEDDLSLASVLKSPLFGLDDDAL
LEIARDPVERLRPGTLWQGLLKKAQDGNRWDHVRQQLEAWRARADFMPPFEFYARLLSVD
GGRRAFRGRMGPEVDDVLDEFLALAMGYEQTGIPGLEGFLAWLAAAPTEIKRELTNAAGL
VRIMTVHGSKGLEAPIVILVDPCNAPVSSHHDPAFLPFTPEDGREQAPALVWLPVKAERM
GWQTAAIDKFRASAAEEYRRLLYVAMTRAEDRLIVCGWQPAKGPKEGCWYDLAASALKPE
AEEVTAPDGTVTAWLWRKPGTDPAAPLKKHSAHAEPEAKKPAAPVPEWLTRPVTPPARMP
RLQPSRVFDAMEMKEGIEAPDGLSALEAHRQAEAYPLERGRLLHRLLELLPDLPEAERAA
AGQRFVATSLPARFASRKDELLGEVMAILEDPDLAPLFAPGGRAEVPISGHMVTADGVTV
SVSGQIDRLVVSPDEVLIADYKTNRHVPADASGIPPDYLAQLAVYRRLVSDIYPGRKVTA
ALLWTSAPKLMMAPEDALDTVLASLKSTDKIA
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggccgcagatcccccttgcaacgcttcagcggcaggaccttgcctcccggcct
cacgcctcggcctgggtgagcgccaatgcgggctcgggcaagaccttcgttctctcgcgc
cgggtggtgcgccagctgctggatggcaccgatccctcgcgcattctgtgcctcaccttc
accaaggccgccgctgccgagatggcaacccgtgtgttcaagatcctcggccagtggatc
gccttgagcgatgatgagctggcaaaggaaattgcagccatcgacggaacgcccccgtcc
cgcgcccgtctggccggggcgcggcggctgtttgcgcaggcgctggaaacgccgggcggg
ctgaagatccagaccatccacgccttctgcgaggcgctgctgcaccagtttccgctggaa
gccaatgtggccgggcatttctcggtgctcgacgaccggctggcggcagaactgatggcg
gaagcgcgcgccttcatgctgcatgccgcagagaccgagccggaaagcccgctgggggcg
gcactgcaacggctgatcggcctgatgccggatgcggctgtcgaggaggttctggccgag
gccatcaaccgccgcgatgccttgcgcaactggatcgtcagcgccggagatctggacgcg
gcactcgaaagccttgcgcgggatttcgggctggaaccggaggcaagccttgaggcgctg
gaagaagagcttcgcgaggcccgcctcatccgcgatccgctggcttttgccgaagccctg
cggcagggcaccaagacggatggtgacaaggcggaccttctgactgctgccgcggctgcg
ctgaagcccggcggtgatcacgccgccttccgccacaactggctgcgggcattcttcacg
caggccatggagccggcgaagcgcctgtgcacggcaggcgtcaccaagcagtttccgcaa
gtggcagaggacatgctggccgaacaggcccggcttgtggccctgctggagaaacgccgg
gccatcgtcacgctggaaggcaccgccgccatcttccgcctcgccgatggcgtcatcggc
cattatgaagcgggcaaggcccggcgcgggttgctggatttcgaagacctcgtggtgcgc
gccgccaatcttctggccaacagcgatgcggccctgtgggtgcagttcaagctggatcag
ggccttgaccacattctggtggatgaggcgcaggacaccagcccccggcagtggcaggtg
atccgctcgctggcggaggagttcttctccggcgaaggcgcaagacgcggcccgcgcact
atcttcgccgtgggcgacgaaaagcagtcgatctattcctttcaaggcgccgtgcccgcc
tatttcgacgaaatgcgccgctatttcgacaaacgcgccgcgcaggcggaccagccgttc
catccggtggagctgcagctgtccttccgctcgacgcccgatgtgctgggcgcggtggac
cgggtgttcctgcccgccgaagcccatgccggcctgtcgcaggaggtgaagcccccggtg
catgaggcgatccgccgcgatcccgggctcgttgagatctggccgctggaagagcccctg
gagagcgaggagccggaggactggaccctgccggtggatcatctgggcaccggctcgccc
atgctgcgggtggccaagcgcattgccgccaccttgcgccggtggatggacgagggcacc
gctgggccgggcgacgtgatgatcctggtgcgcaagcgcgggcccttcgtggaagcgctg
aaccgggagatgaaacggctgggcgtgcctgcagcgggcagtgaccggctggtgctgacc
gagcatattgcggtgatggatctggttgcccttggccgcttcatgctgctgccggaagac
gacctgtcgctggcctccgtgctgaagagcccgctgttcggcctggatgacgatgccctg
ctggaaattgcccgcgatccggtggagcggctgcgccccggcaccctgtggcagggcctg
ctgaaaaaggcgcaggacggcaaccgctgggaccatgtgcgccagcagctggaagcatgg
cgcgcacgcgccgacttcatgccgcccttcgagttctatgcaaggcttctgtccgtcgat
ggcgggcggcgggccttccggggccgcatggggcctgaagtggatgacgtgctggacgag
tttctggcgctggccatgggctatgagcagaccggcattcccggccttgaaggcttcctt
gcctggcttgccgctgcccccaccgagatcaagcgcgagctgaccaatgccgccgggctg
gtgcgcatcatgacggtgcatggctccaaggggctggaagcgccgatcgtcattctcgta
gacccgtgcaacgcccccgtcagcagccatcacgacccggccttcctgcccttcacgccg
gaggacgggagggagcaggcccccgcgctggtgtggctgccggtgaaggccgagcgcatg
ggctggcagactgcggccatcgacaagttccgcgccagtgccgccgaggaataccggcgc
ctgctctatgtggccatgacccgcgccgaggaccggctgatcgtctgcggctggcagcct
gccaagggccccaaagaaggctgctggtatgatctggccgccagcgcgctgaagccggaa
gcagaagaagtgacagcccctgatggcaccgtcaccgcatggctgtggcgtaagccaggc
accgatccggcagcgccgttgaagaagcacagtgcccacgctgagccggaagcaaagaaa
cccgccgcccctgtgccggagtggctgacccgcccggtgacaccgcccgcccgcatgccc
cggcttcagccctcccgcgtgtttgacgcgatggagatgaaggagggcatcgaggcgccg
gacgggctttccgcgctggaagcacaccggcaggcggaagcctatccgctggagcgcggc
cgcctgctgcaccggctgctggaactgctgccggatctgcctgaagccgaacgcgcggct
gccgggcaacgctttgtcgcaacctccctgcctgcccgttttgcgtcccgcaaggacgag
ctgctgggcgaggtgatggccattctggaagacccggatcttgctcccctctttgccccc
ggcgggcgggcggaagtgcccatctccggccatatggtgacggcggacggggtgacggtt
tctgtctccggccagatcgaccggctggtggtgagcccggacgaggtgctgattgccgat
tacaagaccaaccggcacgtgccggccgatgcttcaggcatcccaccggactatcttgcc
cagcttgccgtctaccggcggctggtttcggacatctatccgggccgcaaggtgacggcc
gcgctgctgtggaccagcgcgccgaagctgatgatggcccccgaagatgctctggacaca
gtgctcgccagcctcaagagcacggacaagatcgcttga
DBGET
integrated database retrieval system
