Pannonibacter phragmitetus: APZ00_06135
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Entry
APZ00_06135 CDS
T04214
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pphr
Pannonibacter phragmitetus
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphr03400
]
APZ00_06135
Enzymes [BR:
pphr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
APZ00_06135
DNA repair and recombination proteins [BR:
pphr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
APZ00_06135
Prokaryotic type
APZ00_06135
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ALV26710
UniProt:
A0A0L0IYZ3
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All DBs
Position
complement(1302530..1304161)
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AA seq
543 aa
AA seq
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MPPAPATAPTPSSSLGLQVVWFKRDLRAFDHQPLFEAARLGPVLPLYIVEPGLWAQPDMS
GRQFAFLREFLEELREALARLGQPLIIRTGEAVPVLSALHRARGIAVLWSHEETGNLWTF
RRDLAVKAFARAEGIPWHEPRQTGVVRRLASRNGWAARWDHDMRKPLLPEPLLTPLSSLG
HTIDPGPLPPAGGPGLAPDLCPQRQPGGRKAGLACLESFLHRRGKTYRSGMSSPVSGFDA
CSRLSPHIAFGTLSLREITQRAEDRLSQLVLAGDTPGAATWRGAVSSFLARLHWHCHFMQ
KLEDAPRIEVSNLHPAHDGLRPREPDRARLEAWMKGETGLPFVDATMRALLATGWMNFRM
RAMLMAVSSYHLWLDWRTPGEHLARCFTDYEPGIHWPQVQMQSGTTGINTIRIYNPVKQG
IDQDPDGRFIRRWVPELRAIPDAFLHEPWKAPNAGAVLDKAYPLPVVDHVAAARAARDKV
WSLRKDRDFHKAADTIQERHGSRKAGITRRGREGGARRKRPADTTAQLSFGLLLPEEKGK
GRP
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgccaccagcacctgccacggcccctacaccctcctcctcgctcggcctgcaggttgtc
tggttcaagcgggatttgcgcgcctttgatcatcagcccctgttcgaggccgcccgcctt
gggccggtgctgccgctctatatcgtggagccgggtctgtgggcgcagccggatatgtcc
ggccgccagttcgccttcctgcgtgaattccttgaggagctgcgggaggcgctcgcccgg
ctgggccagccgctgatcatccgcacgggcgaggccgtgccggtgctttccgcgctgcac
cgggcgcggggcattgccgtcctgtggtcgcatgaggaaaccggcaacctgtggaccttc
cgccgcgatctggcggtgaaggcctttgcacgggccgaaggcatcccctggcatgagccg
cgccagaccggcgtggtgcgccgtctggcgagccgcaacggctgggccgcgcgctgggac
catgacatgcgcaagcccctgctgccggaacccctgctcactccgctttccagccttggc
cacactattgatcccggccccctgcccccggcgggcggtcctggcctcgcgccggacctt
tgcccccagcgccagcccggcgggcgcaaggcaggccttgcctgtcttgagagcttcctg
caccggcgtggcaagacctacagatccggcatgtcgagccccgtctctggcttcgatgcc
tgttcgcgcctgtcgccgcatatcgccttcggcacgctttccttgcgcgagattacgcag
cgggcggaagaccggctcagccagctggttcttgcgggggatacgccgggtgcggccaca
tggcgcggtgccgtcagctcctttcttgcccggctgcactggcactgccacttcatgcag
aagctggaggatgcgccgcgcatcgaggtcagcaacctgcaccccgcccatgacggcctg
cgcccgcgcgagccggaccgggcgcggctggaggcctggatgaagggtgaaaccggcctg
ccctttgtggatgccaccatgcgggcgctccttgccaccggctggatgaactttcgcatg
cgcgccatgctgatggccgtctccagctatcacctgtggctggactggcgcacgccgggg
gagcatcttgcgcgctgcttcaccgattatgagcccggcatccactggcctcaggtgcag
atgcagtccggcaccacgggcatcaacaccatccgcatctacaatccggtgaagcagggc
atcgatcaggacccggatggccgcttcatccgccgctgggtgccggagctgcgcgccatt
ccggacgctttcctgcacgagccctggaaggcccccaacgcgggcgccgtgctggacaag
gcctatccgctgccggtggtggatcatgtggcggccgcacgggcggcgcgggacaaggtc
tggtccctgcgcaaggaccgcgactttcacaaggcggctgacaccattcaggagcggcat
ggcagccgcaaggccggcatcacccggcgcgggcgggaaggcggagcaaggcgaaagcgc
ccggcagacaccactgcccagctcagcttcggcctgttgctgccggaggagaagggcaag
ggcagaccatga
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