Pannonibacter phragmitetus: APZ00_06575
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Entry
APZ00_06575 CDS
T04214
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pphr
Pannonibacter phragmitetus
Pathway
pphr03030
DNA replication
pphr03430
Mismatch repair
pphr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APZ00_06575
03430 Mismatch repair
APZ00_06575
03440 Homologous recombination
APZ00_06575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pphr03032
]
APZ00_06575
03400 DNA repair and recombination proteins [BR:
pphr03400
]
APZ00_06575
Enzymes [BR:
pphr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
APZ00_06575
DNA replication proteins [BR:
pphr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
APZ00_06575
DNA repair and recombination proteins [BR:
pphr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
APZ00_06575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
ALV26789
UniProt:
A0A0U3P4Q7
LinkDB
All DBs
Position
complement(1403589..1404632)
Genome browser
AA seq
347 aa
AA seq
DB search
MVALKAGDIDRFVAKPPASVHAILVYGPDTGLVSERAQALVAAVSDGNNDPFSLAKIDAG
DIVSDPNRLIDEALTIPLFGGKRTIWVKDGGGKNLSPAVTPVLALTDCPAVVVIEAGDLK
KGTGLRKLFEADKRAVAIPCYADTARDLEALIDEETRLAGLTISREARQSLHGLLGGDRM
ASRGELRKLCLYALGKGRIETDDIEAIIGDASSFELSELIDAAAGGDLAALDHGLERLEA
AGSNASVIAGQVLGHFQWLHRLRADVDSGGQAAAIIENVKPPVFFKRKAALTRQLSIWAA
PDLERAMTRLAETMRTARLNDRIGMPVLSETLLTLARVARARSAARR
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgcgctcaaagccggtgacattgacaggtttgtcgccaagcctccggccagcgtc
cacgcgatcctcgtctatggccctgacacgggcctggtgtccgagcgggcccaggccctt
gtggccgccgtcagcgacggcaacaacgatcccttcagcctcgccaagatcgatgccggt
gacatcgtttcagacccgaatcgtctgatcgacgaggccctgaccattccccttttcggc
ggcaaacgcaccatctgggtcaaggatggcggcggcaagaacctgtctccggccgtcacg
ccggtccttgccctcacggattgcccggccgtggtcgtcatcgaagccggcgacctcaag
aagggaacgggcctgcgcaagcttttcgaggccgacaagcgcgctgttgccattccctgc
tatgccgacaccgcccgtgacctggaagcgctcatagacgaagaaacccgccttgccggg
cttaccatcagccgcgaggcccgccagagcctgcacgggcttctgggcggcgaccggatg
gccagccggggcgagctgcgcaaactgtgcctctatgccctcggcaagggccgtatcgag
acggacgacatcgaagccatcatcggcgatgcctcgtccttcgagctatcggagctgatt
gatgcggctgcaggcggcgaccttgccgcccttgatcacggccttgaacggctggaagca
gctggcagcaatgcctccgtcatcgccggtcaggtgctcggccacttccagtggctgcac
cggctgcgggcagacgtggattccggcggacaggccgccgccatcatcgaaaacgtcaag
ccgccggtgttcttcaagcgcaaggctgccctcacccgccagctgtccatctgggctgcg
cccgatctggaacgggccatgacacggcttgcagaaaccatgcgcaccgcccgcctgaat
gaccggatcggcatgccggtcctgtccgaaacgctactgaccctcgcccgcgtcgcccgc
gcccgcagcgccgcccgccgctga
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