Pannonibacter phragmitetus: APZ00_06965
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Entry
APZ00_06965 CDS
T04214
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pphr
Pannonibacter phragmitetus
Pathway
pphr00300
Lysine biosynthesis
pphr00470
D-Amino acid metabolism
pphr01100
Metabolic pathways
pphr01110
Biosynthesis of secondary metabolites
pphr01120
Microbial metabolism in diverse environments
pphr01230
Biosynthesis of amino acids
Module
pphr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
APZ00_06965
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
APZ00_06965
Enzymes [BR:
pphr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
APZ00_06965
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
ALV26854
UniProt:
A0A0U3P003
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All DBs
Position
complement(1484710..1485630)
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AA seq
306 aa
AA seq
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MRRPFLKMNGLGNDFVVWDAREAPLRLSPEVIAALGDRTSGIGFDQMITVERSPSGADAF
MRIHNCDGSEVSACGNATRCIGRLLMEEKGVDAVSIETRAGLLLARKVEDGPRSVTVDMG
EPRFGWTEIPLAEEFADTRAVELQIGPIDDPILHTPAVVSMGNPHAVFWVSDVDAYDLDR
IGPLLEHHPLFPEGANISLAQVISRKEIRVRVWERGAGLTRACGTGACAVAVAAARDNRA
DRTSTVHLPGGPLTINWRESDNHVLMTGMTEVEYEGEVDFEAMTFTRTGPGDAELDAAAP
AMETAL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagaccgtttttgaagatgaatggccttggcaacgatttcgttgtctgggatgcc
cgcgaggcaccgctgcggctgagcccggaggtgattgccgcgctgggagaccgtacgtcc
ggcatcggctttgaccagatgatcaccgtcgagcgctcgccctcgggcgcagatgccttc
atgcgcattcacaattgcgacggatcggaagtctctgcctgcggcaatgccacccgctgc
atcggccgcctgctgatggaggaaaagggcgttgatgcggtgagcatcgagacccgcgcc
gggttgctgctggcccgcaaggtggaagacggcccgcgctccgtcaccgtcgacatgggc
gagccgcgcttcggctggactgaaatcccgctcgccgaggaatttgccgacacccgtgcg
gtggaactgcagatcggcccgattgatgatcccatcctgcacacgcccgctgtggtcagc
atgggcaatccgcatgcggtcttctgggtctctgatgtggacgcctacgatcttgaccgt
atcggaccactgctggagcatcatccgctgttcccggaaggggccaatatttcgctggcg
caggtgatatcccgcaaggaaatccgcgtgcgggtgtgggagcgtggcgcaggcctcacc
cgcgcctgcggcaccggcgcctgtgccgtcgccgtggccgctgcccgtgacaaccgcgcg
gaccgcacttccaccgtgcatctgccgggcgggccgctgacgatcaactggcgcgaaagc
gacaatcacgtgctgatgaccggcatgacggaagttgaatacgagggtgaggtggacttc
gaggccatgacctttacccgcaccggaccgggggatgcagagctggatgccgctgccccc
gccatggagaccgcactgtga
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