Pannonibacter phragmitetus: APZ00_07520
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Entry
APZ00_07520 CDS
T04214
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pphr
Pannonibacter phragmitetus
Pathway
pphr03030
DNA replication
pphr03430
Mismatch repair
pphr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APZ00_07520
03430 Mismatch repair
APZ00_07520
03440 Homologous recombination
APZ00_07520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pphr03032
]
APZ00_07520
03400 DNA repair and recombination proteins [BR:
pphr03400
]
APZ00_07520
Enzymes [BR:
pphr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
APZ00_07520
DNA replication proteins [BR:
pphr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
APZ00_07520
DNA repair and recombination proteins [BR:
pphr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
APZ00_07520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_5
AAA_16
RuvB_N
AAA_30
AAA_14
TsaE
AAA_18
AAA_19
DUF815
AAA_assoc_2
AAA_24
AAA_28
Rad17
SRP54
nSTAND3
ABC_tran
Glyco_tranf_2_5
Motif
Other DBs
NCBI-ProteinID:
ALV26945
UniProt:
A0A0U3E5S0
LinkDB
All DBs
Position
1611660..1613672
Genome browser
AA seq
670 aa
AA seq
DB search
MSGMDGDSPGGNGPEHAVEHERDDLTISMFGDAPAEPAPSAPAPAPAGEGKQSGAYRVLA
RKYRPQTFDDLVGQEPMVQTLENAFATGRIAQAWMLTGVRGVGKTTTARILARGLNYEVP
GEVERPTVQLTREGTHCRAIMEGRHVDVIEMDAASHTGINDIREITDAARYRPASARYKV
YIIDEVHMLSNAAFNGLLKTLEEPPEHVKFIFATTEIRKVPVTVLSRCQRFDLRRIEQPK
LVGLLRRISNAESIDISDDALTLIARAGEGSARDSLSLLDQAIAHGGGHIDAGQVRQMLG
LADRARVIDLFGHLMSGRIAEAMEELAGQYAIGADPAVVLTDLADFTHLVTRLKIVPKAG
EEVSVTETERLRGREFAEKLSMRALSRAWQILLKGISEVQAAPKPLAAADMVLVRLAYAA
DLPDPEEALKLLKSGGFPSLSAGGAPQGVGQQGGGQNGGMQPQAGGQMGQPGGQTGPAGQ
GGYAGPTMSGNGPRLSAIAGGAAQSVAQSVAQPSPMPAPQPAAVQQAPAVQLRSLADCAA
LASERRDIPLKVSIERQMRLVKFEPGRIEIQPTKDAGADLAGEFGRKLTEWTGMRWIVSV
SREQGRPTIHEEREATQAQLLSDARSHPTVAALLAEFPGARVVDVRVNEEEESIDDPLLA
EALGTDDDDL
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcatggacggtgacagccccggaggcaacggccccgagcacgcagttgagcat
gagcgggatgacctgacgatctccatgttcggcgatgctccggctgaacctgccccttct
gctcccgcacctgcgcctgctggcgaagggaagcagtccggtgcctaccgggtgctggcg
cgcaagtaccgcccccagacctttgacgatctcgtcggtcaggagccgatggtccagacg
ctggaaaacgcctttgccaccgggcgcattgcgcaggcctggatgctgaccggcgtgcgc
ggtgtcggcaagacgaccaccgcccgtattctggcacgcggtctcaactacgaagttccc
ggcgaggtggagcgtccgacggtgcagctcacccgcgagggcacccattgccgcgccatc
atggaaggccgccatgtcgatgtgatcgagatggacgccgcctcgcacaccggcatcaac
gatatccgcgagatcacggacgcagcgcgttaccgccccgcttcggcgcgctacaaggtc
tacatcatcgacgaagtgcacatgctctccaacgcggctttcaacggcctgctgaagacg
ctggaagagccgccggagcatgtgaagttcatcttcgccaccacggaaatccgcaaggtt
ccggtgacggtgctgtcccgctgccagcgctttgacctgcgccgcatcgagcagcccaag
ctcgttggcctgctgcggcgcatttccaacgccgaatccatcgacatttccgatgatgcg
ctgacgctgattgcccgcgcgggcgaaggctcggcgcgtgacagcctgtccttgctggat
caggcgattgcccatggcggcggtcacatcgatgccggtcaggtgcggcagatgctgggc
cttgccgaccgggcgcgggtgatcgaccttttcggccatctcatgtccggccgcattgcc
gaagcgatggaagagctggccgggcaatatgccattggcgcagaccccgccgtcgtgctg
acggatctggctgatttcacccatcttgtgacccggctgaagatcgtgcccaaagcgggt
gaggaagtctccgtcaccgaaaccgagcgcctgcgcgggcgggagtttgccgaaaagctg
tcgatgcgcgccctgtcccgggcctggcagatcctgctgaagggcatttccgaggtccag
gccgcgcccaagccgctggcggctgccgacatggtgctggtgcgccttgcctatgcggcg
gacctgccggatccggaagaggcgctgaagctgctgaagagcggcggcttcccgtccctg
tccgcaggcggcgcgccgcagggagtaggtcagcaaggtggtggccaaaatggcggcatg
cagccgcaggccggcggtcagatggggcagccgggcggccagactgggcctgcagggcag
ggcggctatgccggccccacgatgagcggcaacggtccgcgcctttcggccattgccgga
ggcgctgcccaatccgtggcccagtcagttgctcaaccgtctcccatgcccgccccgcag
ccagccgccgtgcagcaggcgcctgccgttcagctgcgctcgctggccgactgtgcggcg
cttgcctccgagcggcgtgacattccgctgaaggtctccatcgagcggcagatgcggctg
gtgaagtttgaaccggggcggatcgaaatccagccgacgaaggacgctggtgcggatctg
gccggtgaattcggccgcaagctgaccgaatggaccggcatgcgctggatcgtttccgtc
agccgtgagcagggccgcccgacgatccatgaggagcgcgaggcaacgcaggcccagctt
ctctccgacgcccgctcgcatccgaccgtcgccgcgcttctcgccgaattccccggtgcc
cgcgtcgtcgatgtgcgtgtcaacgaggaagaggaaagcatcgacgatccgcttctcgcc
gaagcccttggcacggatgacgacgacctgtga
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