Pannonibacter phragmitetus: APZ00_09110
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Entry
APZ00_09110 CDS
T04214
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pphr
Pannonibacter phragmitetus
Pathway
pphr00061
Fatty acid biosynthesis
pphr00071
Fatty acid degradation
pphr01100
Metabolic pathways
pphr01212
Fatty acid metabolism
pphr02024
Quorum sensing
pphr04146
Peroxisome
Module
pphr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
APZ00_09110
00071 Fatty acid degradation
APZ00_09110
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
APZ00_09110
09145 Cellular community - prokaryotes
02024 Quorum sensing
APZ00_09110
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pphr01004
]
APZ00_09110
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pphr04147
]
APZ00_09110
Enzymes [BR:
pphr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
APZ00_09110
Lipid biosynthesis proteins [BR:
pphr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
APZ00_09110
Exosome [BR:
pphr04147
]
Exosomal proteins
Exosomal proteins of breast milk
APZ00_09110
Exosomal proteins of breast cancer cells
APZ00_09110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
YwhD
Motif
Other DBs
NCBI-ProteinID:
ALV27200
UniProt:
A0A0U3NC67
LinkDB
All DBs
Position
1965039..1967024
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AA seq
661 aa
AA seq
DB search
MARLTSAAREGADTFPKILLCNAKELGSRTAVREKDLGIWQSWTWAEVLDETRSFSIGLG
SIGLKAGDKVAIVGANRPRLYWSMVAAQALGAIPVPVYADSVAEEMAYVLGHAEVRFAVV
EDQEQVDKLLSMAETVPSLSAVIYDDPRGLRDYDHSRLFSFTGVQDLGRQHMAADPKALS
AWEEGLAQGKGSDIAVMLYTSGTTGRPKGVMLSFDNLVISARNANAFDKLDESEDILAYL
PLAWIGDHVFSLAQAYTAGYCVNCPESLDTVDLDRLEIAPTYFFAPPRVFESMLTRIMVR
MEDAGRMKKAMFDYFMGVARRSGEKILNGQPVPLSDRLLYGLGELLVYGPLKNRIGLTRL
KVGYTAGEAIGPEIFSFYRSLGLNLKQLYGQTEASVYITLQPDGEIFADTVGKPAPQVEL
KIAENGEVLYRSPGTFVAYYKNDEATRTTKTEDGWVFTGDAGFIAPNGHLKIIDRAKDVG
KLNTGALFAPKYIENKLKFFPNIKEAVAFGNERDFVGVFLNIDLTAVGSWAERNNVNYAS
YQELAAHPDVYRMIQQHVDQVNRDLAAEPMMAGAQIHRFLILHKELDADDGELTRTQKVR
RSFIAERYAPLIEGLYDGSTSRHVRTEVTFEDGRTGVIEATVEIRDMTPHAPVQAMREAA
E
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcaagattgaccagcgctgcgagggaaggtgcggacacctttccgaagattctcttg
tgcaatgcgaaagaacttggaagccgtactgcagtgcgggagaaggaccttggtatctgg
caaagctggacctgggctgaagttcttgacgaaacgcgcagcttttcgatcgggcttggc
agtatcggcttgaaggcaggcgacaaggtcgcaattgtcggtgccaacaggccccggctt
tactggtcgatggtggcggctcaggcgctcggcgccatcccggttccggtctatgctgac
tccgtcgcggaagaaatggcctatgttctgggtcatgccgaagttcgctttgcagttgtg
gaggatcaggagcaggtcgacaagcttctctccatggcggagaccgtgccgagcctgagt
gccgtgatctatgatgatccgcgcggcctgcgggactatgaccacagccgcctgttcagc
ttcaccggcgtgcaggatcttggccgccagcacatggcagcagacccgaaggcgctcagc
gcctgggaagaggggctggcacagggcaagggcagcgacatcgccgtgatgctctacact
tccggcaccaccggccgccctaaaggcgtgatgctgtccttcgacaatctggtcatttcg
gcgcgcaacgccaatgccttcgacaagctggacgagagcgaggacatcctcgcctatctg
ccgctggcctggatcggcgaccacgtgttctcgctggcacaggcctatacggccggttac
tgcgtcaactgcccggaaagcctcgacacggtggatctggaccggctggagatcgcgccg
acctatttcttcgctcccccgcgcgttttcgaaagcatgctcacccgcatcatggtgcgc
atggaagatgcaggccggatgaagaaggccatgttcgactatttcatgggagtggcccgc
cggtcgggcgaaaagatcctcaacggccagccggtgccgctcagcgaccggctgctctac
ggccttggcgagcttctggtctatggcccgctgaagaatcgcattggcctgacccggctg
aaggtcggctacacggcgggtgaagccatcggcccggagatcttcagcttctaccgctcg
ctcggcctcaatctgaagcagctctacggccagacggaagccagcgtctacatcaccctg
cagccggatggcgagatctttgccgatacggtcggcaagcccgcgccgcaggtggagttg
aagatcgcggaaaatggcgaagtgctctaccgctcgccgggcaccttcgtcgcctattac
aagaacgacgaggccacccgcaccaccaagacggaagatggctgggtctttaccggtgac
gccggcttcattgcccccaacggccacctgaagatcatcgaccgcgccaaggatgtgggc
aagctcaatacaggcgcgctgttcgcgccgaaatacatcgagaacaagctgaagttcttc
cccaacatcaaggaggcggtggctttcggcaatgagcgggatttcgttggcgtattcctc
aacatcgacctgacggcggtgggcagctgggcggagcgcaacaatgtcaattacgccagc
tatcaggaacttgccgcccatccggacgtctaccggatgatccagcagcatgtggatcag
gtgaaccgggatctggcggcggagccgatgatggcgggtgcgcagatccaccgcttcctc
atcctgcacaaggagctggatgcggatgacggcgagctgacgcgcacgcagaaagtccgc
cggtccttcatcgccgagcgctacgcgccgctgatcgaagggctttatgacggctccacc
tcgcgccatgtgcgcaccgaagtgaccttcgaggacggccgcacgggcgttatcgaggcc
acggtcgagatcagggacatgacgccgcacgccccggtgcaggccatgcgggaggctgca
gaatga
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