KEGG   Pannonibacter phragmitetus: APZ00_09645
Entry
APZ00_09645       CDS       T04214                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K03089  RNA polymerase sigma-32 factor
Organism
pphr  Pannonibacter phragmitetus
Brite
KEGG Orthology (KO) [BR:pphr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pphr03021]
    APZ00_09645
Transcription machinery [BR:pphr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     APZ00_09645
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HTH_11 GntR
Other DBs
NCBI-ProteinID: ALV27295
UniProt: A0A0L0J2C8
LinkDB
Position
complement(2082788..2083678)
AA seq 296 aa
MAQNIPVLTAGEGGLSRYLDEIRRFPMLEPQEEYMLAKRYREHEDPAAAERLVTSHLRLV
AKIAMGYRGYGLPLGEVVSEGNVGLMQAVKRFEPEKGFRLATYAMWWIKAAIQEYILRSW
SLVKMGTTANQKRLFFNLRRLKGRIQALEEGDLKPDQVQAIATKLGVPEEDVISMNRRLA
GDASLNAPIRAAEADSGEWQDWLVDESESQETILADQEELDMRRKLLGNAMSVLNDRERR
IFEARRLSEDPITLEDLSTEFGVSRERVRQIEVRAFEKVQKAVQKSAREMETATPA
NT seq 891 nt   +upstreamnt  +downstreamnt
atggcccagaacattccggtgctgacggcaggcgaaggcggcctcagccgctatctcgac
gaaatccgccggttccccatgctggaaccgcaggaagaatacatgctcgccaagcgctac
cgcgagcatgaagaccctgctgccgccgaaaggctcgtaacctcgcacctgcgtctcgtc
gccaagattgccatgggctaccgtggctatggcctgccgctcggcgaagtcgtatccgaa
ggcaacgttggcctgatgcaggccgtcaagcgcttcgagcccgaaaaaggcttccgcctc
gccacctatgccatgtggtggatcaaggccgcgatccaggaatatatcctgcggtcctgg
tcgctggtgaaaatgggcaccaccgccaatcagaagcgcctgttcttcaacctgcgccgc
ctcaagggccgtattcaggcactggaagagggtgatctgaagccggatcaggtgcaggcc
atcgccaccaagctgggcgtgccggaagaagacgtgatctccatgaaccgccgtctggct
ggtgacgcctcgctgaacgcgccgatccgggctgcggaggccgattccggcgaatggcag
gattggctggtggacgaaagcgaaagccaggagacgatcctcgccgaccaggaagagctg
gacatgcgccgcaagctgctgggcaatgccatgtcggttctcaatgaccgcgagcgccgc
atcttcgaggcccgccgcctgtcggaagatccgatcacgctggaagacctctccaccgag
ttcggcgtcagccgcgagcgcgtgcgccagatcgaggtgcgcgcctttgaaaaggtgcag
aaggcggtgcagaagagcgcccgcgaaatggagacggcaactccggcctga

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