Pannonibacter phragmitetus: APZ00_10625
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Entry
APZ00_10625 CDS
T04214
Name
(GenBank) methylase
KO
K26273
protein strawberry notch
Organism
pphr
Pannonibacter phragmitetus
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pphr03036
]
APZ00_10625
Chromosome and associated proteins [BR:
pphr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
APZ00_10625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
AAA
Motif
Other DBs
NCBI-ProteinID:
ALV27460
UniProt:
A0A0U3PTI6
LinkDB
All DBs
Position
2295307..2299656
Genome browser
AA seq
1449 aa
AA seq
DB search
MNMISASAAASATAPLPLDQDAETAACVFTAAGLLLPHLERGQRVDAAALRGAMEAAFGA
SDATGAWTWKTAYDACEAAAVLFLRKYGTALFRKAGSPAVILPQLGKIAGLLPTHTRRSE
EAQTFQQFSTPIPLGFAAVTAAAITPADRVLEPSAGTGLLAILAEIAGGTLLVNELAEMR
AGLLTSLFPALSVTGFDAAQIDDHLDPGLVPTVVLMNPPFSVMAHVEGRVADAAFRHVAS
ALARLAPGGRLVTITGASFAPDNPAWMAPWTRLQERGRVVFSASIDGSVYAKHGTTIDTR
LTVIDKLPAEDPAVFPAAPGVAPDVATLIGWLADHLPARLPVDPGIAVPAAQPAAPRTVR
GYVNRAARSAPAAPLAEPEGVPLAYETVDWEPAEGGRLSDAIYEEYGLQTIRIAGAQAHP
TQLVQSASMASIAPPKPSYRPTLPKDILGKLSEAQLETVIYAGEAHGGFLAGGWTIDDTL
DNLAAAPEDAEGAIRFRQGFMVGDGTGVGKGRESAAIILDNWMQGRRKAVWISKSDKLLE
DAQRDWSALGMERLLVTPLSRFPQGAQITLNEGILFLTYATLRSDDRGERVSRVRQIVEW
LGKDFDGVVIFDEAHAMANAAGGKGERGDVAASQQGRAGLRLQHALPQARVAYVSATGAT
TVHNLAYAQRLGLWGGEDFPFSTRAEFVEAIEAGGVAAMEVLARDLRALGLYTARSLSFK
GVEYELLDHELTPEQVRIYDSYADAFSVIHNNLDAAMQAANITGGDGGSGTLNRQAKSAA
RSAFESAKQRFFGHLLTSMKTPTLIRSITSDLDAGHSSVIQIVSTGEALMERRLAEIPTE
EWGDLKMELSPREYVLDYLAHSFPVQLYEPFTDSEGNLSSRPVYRDGQPVESREAVARRD
EMIASLASLPPVPGALDQIIQHFGTDTVAEVTGRSRRIVRKRGVTIDRLVVESRAGSANL
AETQAFMDDAKRVLVFSDAGGTGRSYHAELSAKNTRLRVHYLLEAGWKADAAIQGLGRTH
RTNQAQPPLFRPISTNVKAEKRFLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESHY
ARDALRQLYLLMVRGKVDGCSLERFESATGLKLMDSNGIKDDLPAITTFLNRLLALTIEL
QGVLFTAFEQLLTARIEGAIASGTYDAGLETLRAESFAVTNRQVIYTHPRTGAETSLLTI
TERRRNRPVTLDAALAELDDPRAKLLINERSGRAAVQIPTTSVMLDDGEIERRVRLIRPM
EAHNVPVRMMGETHWVEADRDAFASAWNAELAEVPEFADSTLHMVTGLLLPIWKRLPNDS
TRVYRLQTDADERIIGRKVSPAWAANATTTGIAKVAPEDAFTALMEGRTILDLAEGLQLR
RVRVMGVNRIELSGFTDTMRQRLSAYGLFHEIISWKLRMFVPVDASGPAVLAKLLDRWSV
ERISERETA
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgatctccgcatccgcggcggcatccgccaccgcgccgcttccgctcgaccaa
gacgctgagaccgcagcctgcgtcttcaccgcagccggtctgctgctgccgcatctggag
cgcggtcagcgtgtcgatgccgccgcgctgcgcggcgcgatggaagcggcctttggcgcg
tccgacgccaccggcgcctggacctggaagaccgcctacgacgcctgcgaggcggcggcg
gtcctgtttctgcgcaaatacggcactgcgcttttccgcaaagccgggtctccggcggta
atcctgccgcagctcggcaagatcgccgggcttctgccgacgcatacgcgccgctcggag
gaagcgcagaccttccagcagttctcgaccccgatcccgctcggtttcgcggcggtcacg
gcggcggcaatcacccccgcggaccgggtgctggaaccctcggccggcaccgggctcctc
gccatcctggccgagatcgccggcggtacgcttctcgtcaatgaactggccgagatgcgc
gccggtctcctgacttccctctttccggccctgtccgtcaccggcttcgacgcggcccag
atcgacgaccatctcgatccaggccttgttccgaccgtggtgttgatgaatccgccgttc
tcggtcatggcccatgtcgagggccgcgtggcggacgccgcctttcgccatgtcgcttcg
gcgctggcgcgtcttgcgcccggcggacggctcgtgaccatcaccggcgcgagcttcgcc
cccgataatccggcgtggatggcaccctggacccggctgcaggagcgcggccgcgtggtt
ttctcggcctccatcgatgggtcggtctatgccaagcatggcaccaccatcgacacgcgg
ctgaccgtcatcgacaagctgccagccgaagacccggcggtgtttccggccgcgcctggt
gtcgccccggacgtggccacgctgattggctggctggcggatcatttgcccgcgcggctg
ccggtcgatccgggcattgccgtgccggccgcacagcctgccgcgccccgcaccgtgcgc
ggctacgtcaaccgcgccgcgcgatccgcgcccgccgcgcctctggccgagccggagggt
gtgccgctcgcttatgagacggtggattgggaaccggccgagggcggtcgcctatccgac
gctatttacgaggaatatggtctccagaccatccgcatcgccggggcacaggcgcatccg
acccagctcgtgcagtcggcctcgatggcgagcatcgcgccgccgaaacccagctatcgg
cccacgctcccgaaagacatcctcggcaagctgtccgaggcgcagttggagaccgtgatc
tatgccggcgaggcccatgggggcttcctcgccgggggctggacgatcgatgacacgctc
gacaatctcgccgccgcgccggaggatgccgagggcgccatccgcttccggcaggggttc
atggtcggcgacggcaccggcgtcggcaaggggcgggaatctgccgccatcatcctcgac
aactggatgcaggggcggcgcaaggcggtctggatctcgaagtccgacaagctgctggag
gatgcgcagcgcgattggtcggccctcggcatggaacggctgctggtcacgccgctgtcg
cgattcccgcaaggcgcacagatcacgctgaacgaaggcatcctgtttttaacctatgcc
acgctgcgctccgacgaccgcggagaaagggtttcgcgcgtcaggcagatcgtcgaatgg
ttgggcaaggatttcgatggggtggtgattttcgacgaggcgcatgccatggccaatgcc
gcagggggcaagggagagcgcggcgatgtcgccgccagccagcagggtcgtgccgggctg
cgccttcaacatgccctgccgcaggcccgcgtggcttatgtctcggccaccggcgccacc
accgtccacaatctcgcctatgcgcaaaggttgggcctctggggcggcgaggatttcccg
ttctcgacccgagccgagttcgtcgaggcgatcgaggccggcggcgttgcggcgatggaa
gtgctggcccgcgacctgcgcgccctcggcctctacaccgcccggtccttgtccttcaaa
ggcgtcgaatacgagttgctcgaccatgagctgacgccggaacaggtccgcatctacgac
agctatgccgatgccttcagcgtcatccataacaatctcgatgcagcgatgcaggccgcc
aacatcaccggcggcgacggcgggtccggcacgttgaaccggcaggccaaatccgccgcc
cgctcggccttcgagagcgccaagcagcggtttttcggccatttgctcacgtccatgaaa
accccgacgctgatccggtcgatcaccagcgatctggacgcgggccattcctccgtcatc
cagatcgtctcgaccggcgaagcgctgatggaaaggcggctggcggagatccccaccgag
gaatggggcgatctgaaaatggagctctcacctcgtgaatatgtcctggattacctcgcc
cattccttcccggtgcagctctacgagccgttcacagattcggagggcaacctgtcctca
cgcccggtctatcgcgacggccagccggtcgagagccgcgaggccgtggcccggcgcgac
gagatgatcgcaagcctcgccagcttgccgccggttcccggcgcgctcgaccagatcatc
cagcatttcggcaccgacacggtggccgaggtgacgggccgctcgcgccgcatcgtccgc
aagcgtggcgtcaccatcgaccggcttgtcgtggaaagtcgtgccggttctgccaatctg
gccgagacgcaagccttcatggatgatgccaagcgcgtgctggtgttttctgacgcgggc
ggcacgggccggtcgtatcacgccgaactgtcggcgaagaacacccggctgcgtgtccac
tatctcctcgaagccgggtggaaggcggacgccgccatccagggactcggccgcacccat
cgcaccaatcaggcccagccgccgctgttccggccgatctcgaccaatgtgaaggccgag
aagcgtttcctctcgaccattgcccgccgcctcgacacgctgggcgcgatcacgcgcggc
cagcggcagaccggcggccagggcctgttccggcccgaggataatctggaatcgcattac
gcacgcgacgcgctccgccagctctatctcttaatggtgcgcggcaaagtcgatggctgc
agccttgagcggttcgagtccgcgaccggcctaaagctgatggactcgaacggcatcaag
gatgatctgcccgccatcaccaccttcctcaaccggctgctggcgctgactatcgagctt
cagggcgtgctcttcaccgccttcgagcagcttctgaccgcgcgcatcgagggcgccatc
gcatctggcacctatgatgccgggctggagacgctgcgcgccgagagcttcgccgtcacc
aaccggcaggtgatctacacccacccgcgcaccggggccgagaccagcctgctgaccatc
accgagcgcaggcgcaaccgcccggtgacgctcgatgccgccctggcggaactcgatgat
ccgcgcgcgaagctgctgatcaacgagcgctcggggcgcgcggcggtgcagatccccacc
accagcgtcatgctggacgatggcgagatcgagcgccgcgttcggctgatcaggccaatg
gaggcccataacgtcccggtcaggatgatgggcgaaacccattgggtcgaggcggaccgg
gacgccttcgcctcagcctggaatgccgaactcgcggaagtgcctgagttcgcggacagc
acgctgcatatggtgacgggcctgctgctgccaatctggaagcggctgccgaacgactcc
acccgcgtctatcggctccagaccgatgccgacgagcgcatcatcggccgcaaggtctcg
ccggcctgggcggcaaacgcgaccacgaccggcatcgcgaaggtcgcgccggaggatgcc
ttcacggcgctgatggaaggccggacgatcctcgatctcgccgagggcctccagcttcgc
cgggtccgcgtcatgggggtgaaccgcatcgagctttccggcttcaccgataccatgcgc
cagcgtctcagcgcctatggcctgtttcacgagatcatctcgtggaagctgcgcatgttc
gtgccggtcgatgccagcggacccgccgtgctggccaagctgctcgaccgctggtcagtc
gaacgcatcagcgagcgggagacagcatga
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