Pannonibacter phragmitetus: APZ00_11315
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Entry
APZ00_11315 CDS
T04214
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pphr
Pannonibacter phragmitetus
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphr03400
]
APZ00_11315
DNA repair and recombination proteins [BR:
pphr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
APZ00_11315
Archaeal homologous recombinant proteins
APZ00_11315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ALV27584
UniProt:
A0A0U3ND97
LinkDB
All DBs
Position
complement(2421710..2424784)
Genome browser
AA seq
1024 aa
AA seq
DB search
MRPVRLTLQAFGPYPGRVTIDFRTAVDAGLFGIYGQTGSGKSTIFSAMTFALFGEAAKAE
QDASSLRSDHADADMLTEVEFVFDIAERRYTALRRPEQMRLKTRGGGETRSAHEAYLFDA
TGLEPEEISQAQRGRIIAEKKVRDVDAAIEDLLGYGARQFRQIVLLPQGRFEEFLAAKTK
ERLEILRELFDVSRYETLMADLKSEAEAAERHVREELALSARQLNAEGFESFDALDEGIE
AAQARLAGLELAQTEVRAETEAAEKRLRLAEALEEKFAAADQAKARLAELEARRPQIEAL
AGQVRQADLARGLLDPEERVKDAQAETAKAAESLRLATDSAGKTAKAAADAEAALQREEA
RSDEVETLRRQKDDLGRYGRVLDAAAGSEETASAALKAQEEAAARLETAQGRLAGLRQER
DRAQETLKVQRETEKQRALLAGQHRDLDARHAAASAYARALEEVSAARNAEERQQVVHAA
TQEKAGQAQRDLEAAEQSLSGAQALHLAARLEPGAPCPVCGATEHPAPATGEAANAGLDA
AFRKAKAAWEATGREVSQAAEKLAGLKATRAEREARLAALSQPEEPAPLLAGQLKQLADA
LAALGPEADAASAEDGLAALDRQLAALELERDRLRDQFEESRNTATSAISARDSQLADVP
ADLRSPQALAAALHKVSQALDKLVAGRTAAAAADRAAREKALAAARDLENAKAQHLSCQE
RQQKAEEAFAARLAGADLSLEAFQSLKPAIATLDADRQAVEAFWREHRSAEDAASAAALA
TGDASRPDTVSLREAHAAFAEKLTLASEERAAAASRAAHLERVKTSLSGMVEKAKAAEAE
TAPLRALAALVNGGNPQKLTLETFAIGAMFDQVLEAANLRLAPMTASRYRLERDMDGTGA
GKRGLGIQVFDMHTGKARGTGTLSGGESFIAALALALGLADVVEGASGKVRLDTIFIDEG
FGSLDTENGSGTLDQVLQVLGALVSQNRAVGLISHVPQVQEAIPNGFHIRKSAAGSSIEE
RSLP
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgagaccggtcaggctcacccttcaggccttcggcccctatcccggccgggtcaccatt
gatttccgcacggcagtcgatgccggtcttttcggcatctatggccagacgggctcaggc
aaatcgacgatcttcagtgccatgaccttcgcccttttcggcgaggccgcgaaagcggag
caggacgcctcctcgctgcgctcggaccacgccgatgcggacatgctgaccgaagtcgaa
tttgtcttcgacatcgcagagcgccgctacaccgccctgcgccgcccggaacagatgcgc
ctcaagacccggggtggcggcgaaacccgcagcgcgcatgaagcctatctcttcgacgcc
accggtctggagccggaggagatttcacaggcgcagcgcggccgcatcatcgccgaaaag
aaggtgcgggatgtggatgcggccatcgaggatctgctcggctatggtgcgcggcagttc
cgccagatcgtgctgctgccgcagggccggtttgaggagtttctggccgccaagacaaag
gagcggctggagatcctgcgcgagctcttcgatgtctcccgctatgagacgctcatggcg
gatctgaaatcggaagccgaggctgccgagcggcatgtgcgcgaggagcttgctctgtcc
gcccggcagctgaatgcggaaggcttcgagagcttcgatgcactggatgagggcatcgaa
gcggctcaggcccgccttgccgggcttgagcttgcccagacagaggtgagagcggaaacg
gaggccgccgaaaagcgcctgcggcttgccgaagcccttgaggagaaattcgccgctgca
gatcaggcgaaggcacggctggcggaactggaagcccggcgcccgcagattgaagcgctg
gccggacaagtgcggcaggctgaccttgcgcgcggcctcctcgacccggaagagcgggtg
aaagatgcacaggccgagaccgcgaaggccgccgaatctctgcggcttgcaacagacagc
gccgggaaaaccgcaaaagcggcggcggacgcagaggcggcgctgcagcgcgaggaggcg
cggtctgacgaagtggaaacactacgccgccagaaggatgaccttggccgctatggccgt
gtattggatgccgccgccggaagcgaagagacagcctccgccgcgctgaaggcccaggaa
gaggccgcagccaggctggagacggcacaaggcaggcttgccggcctgcggcaggagcgt
gaccgggcgcaggaaaccctgaaggtgcagcgcgagacggaaaagcagcgcgcccttctc
gccggacagcaccgcgaccttgacgcaagacatgcggcggcatccgcctatgcccgagcg
cttgaggaggtgtctgcagcccgtaacgcggaagagcggcagcaggttgttcatgcagca
acccaggaaaaggccggacaggcgcagcgggatctcgaagccgccgaacaaagcctttcg
ggtgcacaggcgctgcatttggccgcccggctggagccgggcgcgccctgccccgtctgc
ggcgccaccgagcacccggctcccgccacgggcgaagccgcaaacgcagggctggacgcg
gccttccggaaggcaaaggccgcgtgggaggcaacaggccgtgaggtgagccaggcggct
gaaaagctggcaggcctcaaggcaacacgggcggagcgggaggcgcgccttgccgcgctt
tcacagcccgaagagcccgcgccgcttctggccggacagctgaaacagctggccgatgca
ctcgccgcgctcggaccggaggcagatgccgcttccgccgaagacggtcttgccgcgctg
gaccggcagcttgcagcccttgaacttgagcgcgacaggctgcgggatcagttcgaggaa
agccgcaacacggcaacgtccgccatcagcgccagagacagccagcttgcagacgtgccc
gcagacctccggagcccgcaggcccttgctgcggcccttcacaaggtctcgcaggcgctg
gacaagcttgtggccgggcggacggcagccgccgcagctgaccgggcagcgcgggaaaag
gcccttgctgccgcacgcgacctcgaaaatgccaaggcgcagcatctgagctgccaggag
cggcagcagaaggccgaggaagcatttgctgcaaggcttgccggagcggacttgagcctt
gaggcttttcagtctctcaaaccggcgatcgcaacgcttgatgccgacaggcaagccgtc
gaggccttctggcgcgagcaccggagcgcggaagacgccgccagcgcagcggcgctggca
accggcgatgccagccgcccggataccgtctccttgcgtgaggcccatgctgcctttgct
gaaaagctgacgctggcatcagaagagcgggccgcagccgccagccgggcggcccacctt
gagcgcgtcaagacctccctgtctgggatggtcgagaaggcgaaggctgcggaggctgaa
acagcacccttgcgggcgcttgcagctctggtgaatggcggcaatccgcagaagctgacg
ctggagacctttgccatcggtgccatgttcgatcaggtgctggaggcggccaacctgcgg
ctggcaccgatgacggcgagccgttaccggctggagcgcgacatggacggcacgggcgcc
ggcaagcgcggccttggcattcaggtcttcgacatgcacacgggcaaggcgcgcggcaca
ggcacgctctcgggcggcgaaagcttcatcgccgccctcgcccttgcgcttggccttgcc
gacgtggtggaaggcgccagcggcaaggtgcggctcgacacgatcttcatcgacgaaggc
tttggcagtctcgatacggaaaacggctcgggcacactcgatcaggtgctgcaggtactg
ggcgcgctggtcagccagaaccgggccgtcggcctgatttcccatgtgccacaggtacag
gaagccattcccaacggcttccacatccgcaaatccgccgccggcagcagcatcgaggaa
cgcagcctgccgtga
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