Pannonibacter phragmitetus: APZ00_11555
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Entry
APZ00_11555 CDS
T04214
Name
(GenBank) transcriptional regulator
KO
K14414
transcriptional regulatory protein RtcR
Organism
pphr
Pannonibacter phragmitetus
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphr03000
]
APZ00_11555
Transcription factors [BR:
pphr03000
]
Prokaryotic type
Other transcription factors
Others
APZ00_11555
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA
AAA_5
Mg_chelatase
MCM
AAA_22
AAA_16
AAA_14
ATPase_2
AAA_33
NACHT
AAA_7
T2SSE
NTPase_1
AAA_30
AAA_18
ABC_tran
TsaE
AAA_2
AAA_29
AAA_19
TniB
Motif
Other DBs
NCBI-ProteinID:
ALV27623
UniProt:
A0A0U3MTM6
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All DBs
Position
complement(2479207..2480823)
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AA seq
538 aa
AA seq
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MKRRVAISILGTTLDMGGRSDRWKRWRPNVALTQQPGLFFDRVELVHDSHFDRLAQTVIR
DIDTVSPATEVRQNIINLSDPWDFSEVYTKLRDFARAYPFDPDAEDYLVNITTGTHVAQI
CWFLLTEARIIPARLLQLSPPRDREPDQDYSGSHTIIDLDLSRYDEIATRFASEQAEAAS
FLKSGISTRNTAFNRMIDEIERVAMRSSAPLLLTGPTGAGKSQLARRLYELKKAQRKVSG
PFVEVNCATLRGDQAMSALFGHVKGAFTGASSERAGLLMSADKGVLFLDEIGELGLDEQA
MCLRAIEEKRFLPVGADREVSADFQLLAGTNRDLREEVRKGRFREDLLARLNLWTFQLPA
LRDRTEDIEPNLDFELRRFLEREGQNVTFNKEARERYLAFASSPAAAWSANFRDLSASVT
RMATLAPQGRITVEEVAAEVARLKAAWAGAAQEDAAGDILTAALGAEAAAELDLFDQAQL
AAVLKVCREHPSASSAGRALFARSRLGKKSSNDADRLTKYLARFGLKFDEIQRRTGDA
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgccgcgttgccatcagcatcctcggaaccactctcgacatgggcggccgcagt
gaccgctggaagcgatggcggccgaatgtcgccctgacgcagcagccgggcctcttcttc
gacagggtggagcttgttcacgacagccatttcgaccggctggcgcagaccgtgatccgg
gacatcgacaccgtgtctcccgccaccgaagtgcggcagaacatcatcaacctgtcagac
ccttgggatttctctgaggtctatacaaagctgcgcgactttgcccgcgcctatccgttc
gatccggatgcggaggactatctcgtcaacatcaccacgggcacccatgtggcgcagatc
tgctggttcctgctgacggaagcgcgcatcattcccgcaaggctgctgcagctctccccg
ccgcgcgacagggagccggatcaggactactccggctcacacacgatcatcgacctcgat
ctttcgcgctatgacgagatcgccacccgttttgcctcggaacaggcggaagccgcctcc
ttcctcaagtccggcatctcgacccgcaacaccgctttcaaccggatgatcgacgagatc
gagcgtgtcgccatgcgctccagcgcgccgctgcttctcaccgggccaacgggcgcgggc
aagtcccagctggccaggcggctctatgagctgaagaaggcccagcgcaaggtcagcggt
ccatttgtcgaggtgaattgcgccacgctgcggggtgatcaggccatgtccgccctcttc
ggccacgtgaaaggcgctttcaccggcgcctcgtccgagcgggcgggcctgctcatgtcg
gcggacaagggcgtgctgtttctggacgagatcggcgaactggggctggacgagcaggcc
atgtgcctgcgcgccatcgaggaaaagcgcttcctgccggtaggcgcggacagggaagtt
tcggccgatttccagcttctcgccggcaccaaccgggatctgcgcgaggaggtgcgcaag
ggacgcttccgggaagacctgctggcccggctcaacctgtggaccttccagctgcccgcc
ctgcgtgaccggacagaggacatcgagcccaacctcgacttcgagctgcgccgctttctg
gaacgcgagggccagaacgtcaccttcaacaaggaagcccgcgagcgctacctcgccttc
gcctcctctccggctgcggcatggagcgccaatttccgcgacctctccgcctcggtgaca
cgcatggccaccctcgccccgcaaggacggatcaccgtggaggaggttgccgcggaagtg
gcacgcctgaaggcggcatgggcgggggcagcacaggaagacgcagccggtgatattctc
actgccgcactgggagcagaagctgcagcagagctggatctcttcgatcaggcccagctt
gccgccgttctgaaagtctgccgcgagcaccccagcgccagcagtgcgggacgggcactg
ttcgcccgctcccggctcggcaagaaaagcagcaacgacgcggaccggctgaccaaatac
ctcgcacgtttcggcctgaagtttgacgaaatccagcgccggacaggagacgcctga
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