Pannonibacter phragmitetus: APZ00_13050
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Entry
APZ00_13050 CDS
T04214
Name
(GenBank) ribulose 1,5-bisphosphate carboxylase small subunit
KO
K01602
ribulose-bisphosphate carboxylase small chain [EC:
4.1.1.39
]
Organism
pphr
Pannonibacter phragmitetus
Pathway
pphr00630
Glyoxylate and dicarboxylate metabolism
pphr00710
Carbon fixation by Calvin cycle
pphr01100
Metabolic pathways
pphr01110
Biosynthesis of secondary metabolites
pphr01120
Microbial metabolism in diverse environments
pphr01200
Carbon metabolism
Module
pphr_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
APZ00_13050
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
APZ00_13050
Enzymes [BR:
pphr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
APZ00_13050
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_small
Motif
Other DBs
NCBI-ProteinID:
ALV27876
UniProt:
A0A0L0IV74
LinkDB
All DBs
Position
complement(2835935..2836324)
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AA seq
129 aa
AA seq
DB search
MRITQGCFSFLPDLTGEQIAAQVDYCLSRGWAIGLEYTDDPHPRNTYWNMWGNPMFDLRD
AKGVMMELEACRKAHPQTYIRVNAFDSTRGAETVTMSFIVNRPGDEPALVMRRTEAEGRS
IRYTHDVIR
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcacacagggctgcttttccttcctgcccgacctgaccggcgagcagatcgcc
gcccaggtcgactactgcctgtcgcgcggctgggcaatcgggctcgaatacaccgatgat
ccccatccccggaacacctactggaacatgtggggcaacccgatgttcgacctgcgcgac
gccaagggcgtgatgatggagcttgaggcctgccgcaaggcgcatccgcagacctatatc
cgcgtcaatgctttcgacagcacgcgcggcgccgagacggtgaccatgagcttcatcgtc
aaccggcccggcgacgagccggcactcgtgatgcgccggaccgaggccgagggccgctcg
atccgctacacccatgacgtgatccgctga
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