Pannonibacter phragmitetus: APZ00_13055
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Entry
APZ00_13055 CDS
T04214
Symbol
rbcL
Name
(GenBank) ribulose 1,5-bisphosphate carboxylase
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
pphr
Pannonibacter phragmitetus
Pathway
pphr00630
Glyoxylate and dicarboxylate metabolism
pphr00710
Carbon fixation by Calvin cycle
pphr01100
Metabolic pathways
pphr01110
Biosynthesis of secondary metabolites
pphr01120
Microbial metabolism in diverse environments
pphr01200
Carbon metabolism
Module
pphr_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
APZ00_13055 (rbcL)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
APZ00_13055 (rbcL)
Enzymes [BR:
pphr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
APZ00_13055 (rbcL)
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GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
ALV30072
UniProt:
A0A0U3NB18
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All DBs
Position
complement(2836336..2837802)
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AA seq
488 aa
AA seq
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MADDSNTRITDASKRYKAGVLKYAQMGYWDGDYEPKETDLLALFRITPQEGVDPIEAAAA
VAGESSTATWTVVWTDRLTACDQYRAKAYKVEPVPGTPGQYFCYVAYDLILFEEGSIANL
TASIIGNVFSFKPLKAARLEDMRLPVAYVKTFRGPPTGIVVERERLDKFGKPLLGATTKP
KLGLSGKNYGRVVYEGLKGGLDFMKDDENINSQPFMHWRDRFLYVMEAVNKASAETGEVK
GHYLNITAGTMEEMYRRADFAKQLGSVIVMVDLIVGWTAIQSISEWCRQNDMILHMHRAG
HGTYTRQKNHGISFRVIAKWLRLAGVDHLHTGTAVGKLEGDPMTVQGYYNVCRETRNEVD
LPRGLFFEQDWADLKKVMPVASGGIHAGQMHQLLSLFGDDVVLQFGGGTIGHPMGIQAGA
TANRVALEAMVLARNEGRNIDAEGPEILRAAAKWCKPLEAALDTWGNITFNYTSTDTSDF
VPAPAVAV
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacagcaacacgcggattaccgacgcctcgaagcgctacaaggccggcgtc
ctgaaatacgcccagatgggctactgggacggcgactacgagccgaaggagaccgatctc
ctcgccctgttccgcatcaccccgcaggagggcgtcgacccgatcgaggcggcggcggcg
gtggccggcgaaagctccaccgccacctggacggtggtgtggaccgaccggctgacggcc
tgcgaccagtaccgggccaaggcctacaaggtcgagccggtgccgggcacgcccggacag
tatttctgctatgtcgcctacgacctgatcctgttcgaggaaggctcgatcgccaacctg
acagcctcgatcatcggcaacgtgttctcgttcaagccgctgaaggcggcgcggctggag
gacatgcggctgcccgtcgcctatgtgaagacgttccgcggcccgccgaccggcatcgtc
gtggagcgcgagcggctcgacaagttcggcaagccgctgctcggcgccaccaccaagccg
aagctcgggctttcgggcaagaattacggccgggtcgtctatgagggcctgaagggcggc
ctcgatttcatgaaggacgacgagaacatcaactcgcagcccttcatgcattggcgcgac
cgctttctctacgtgatggaggcggtcaacaaggccagtgccgaaaccggcgaggtgaag
gggcactacctcaacatcaccgccggcacgatggaggaaatgtaccgccgggcggacttc
gccaagcagctcggcagtgtcatcgtcatggtcgacctgatcgtcggctggaccgcaatc
cagtcgatctcggaatggtgccggcagaacgacatgatcctgcacatgcaccgggccggc
cacggcacctatacccgccagaagaaccacggcatctcgttccgcgtcatcgccaagtgg
ctgcggcttgccggcgtcgaccacctgcacaccggcacggccgtcggcaagctggagggc
gacccgatgacggtgcagggctactacaatgtctgccgcgagacccgcaacgaggttgac
ctgccgcgcggcctgttcttcgagcaggactgggcggacctgaagaaggtcatgccggtg
gcctcgggcggcatccatgccggccagatgcaccagcttctctcgctgttcggcgatgat
gtggtgctgcagttcggtggcggcaccatcggtcatccgatgggcatccaggccggcgcc
accgccaaccgcgtcgcactggaggccatggtgctggcccgcaacgaaggccgcaacatc
gacgccgaggggcccgagatccttcgcgcggcggcgaagtggtgcaagccgctggaagcg
gccctcgatacctggggcaacatcaccttcaactacacctcgaccgacacgtcggacttc
gtcccggcgcccgcggtcgccgtttga
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