Pannonibacter phragmitetus: APZ00_14360
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Entry
APZ00_14360 CDS
T04214
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pphr
Pannonibacter phragmitetus
Pathway
pphr00470
D-Amino acid metabolism
pphr00550
Peptidoglycan biosynthesis
pphr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
APZ00_14360 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
APZ00_14360 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pphr01011
]
APZ00_14360 (murD)
Enzymes [BR:
pphr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
APZ00_14360 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pphr01011
]
Precursor biosynthesis
Amino acid ligase
APZ00_14360 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
KARI_N
FAD_binding_3
PE
FAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
ALV28097
UniProt:
A0A0U3E973
LinkDB
All DBs
Position
3125161..3126561
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AA seq
466 aa
AA seq
DB search
MIPVTCFKGKKVALFGLGGSGLSSALALKEGGAHVIVWDDAPARNDLARSKGLEARDLAE
LDWKGLSALVLSPGVPLTHPEPHWTVELAREAGVEVIGDIELFSRERALVCPDAPVICIT
GTNGKSTTTALTTHLLKSLGRDVQMGGNIGTPVFDLAPLAPHRHYVIECSSYQIDLAPGL
APTAGIHMNLSPDHLDRHGTMENYAGIKERLVAAARTAIVGVDDEMSAAIADRLEAAGHD
VRRISGHQTQTHGVFARDGLLICADKGVETVIADLSRAPSLRGQHNAQNAAAACAALLAL
GVAPQELAAGLESFPGLKHRMQIIARHEGTLFINDSKATNADATAWALASYPRLYWIAGG
KPKSGGIEPLGEFFPRIVRAYLIGEAAEEFARTLDGKVPYEISGTLDVAVQRAAADAALD
PQAEKVIMLSPACASFDQYPNFEVRGDAFAESVRALLAVPEKTEDA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggtcacctgcttcaagggaaaaaaggtagcgctcttcgggcttggcggctcg
ggcctttccagtgcgctggcgctgaaggaaggcggggcgcatgtcattgtctgggacgat
gcgcctgcgcgcaatgatcttgcccgttccaaaggtcttgaggcccgcgatctggccgaa
ctcgactggaaggggctgtcggcgctggtgttgtcacccggtgtgccgctgacccatccc
gagccgcactggacggtggagctcgcacgtgaggcgggcgtcgaagtcattggcgacatc
gagctgttttcgcgcgaacgggcgctcgtgtgcccggacgcccctgtcatctgcatcacc
ggcaccaatggcaagtccaccacaacggcactgaccacgcatctgctgaagtcgctgggc
cgcgacgtgcagatgggcggcaacatcggcacgccggtgttcgacctcgcccctctggcg
ccgcaccggcattatgtcatcgagtgctcgtcctatcagatcgatcttgctcccggtctc
gccccgacggccggcattcacatgaacctgtcgccggatcatctcgaccggcacgggacc
atggagaactatgccggcatcaaggagcggctcgttgctgcggcccgcaccgccatcgtc
ggcgtggatgatgaaatgagtgctgccatcgcggaccggctggaagctgccgggcacgat
gtgcgccgcatttccggccatcagacgcagacccatggcgtctttgcccgtgatggcctg
ctgatctgcgcggacaagggcgtagagacggtcattgccgatctgtcgcgtgcaccgtcg
cttcgcggccagcacaatgcccagaacgcggcggcggcctgtgctgcactgctggcgctt
ggcgtggcaccgcaggagcttgctgcagggcttgagagcttccctggcctcaagcaccgg
atgcagatcatcgcccgccatgagggcacgctgttcatcaatgacagcaaggcgaccaac
gcggatgccacggcctgggcgctggcgagctatccccggctttactggatcgcgggcggc
aagccgaagtcgggcggcattgagccgctgggcgagttcttcccgcgcattgtccgggcc
tatctgatcggcgaggcggccgaggagtttgcccgcacgctggacggcaaggtgccctac
gagatcagcggcacgctggacgtggcggtgcagcgggcggcggcggatgccgcgctcgat
ccgcaggccgagaaggtgatcatgctgtctccggcctgtgcctcgttcgaccagtatccg
aattttgaagtgcgtggtgatgcgtttgccgaaagcgtccgggccctgttggcggtgccg
gaaaagacggaggatgcctga
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